Job Description P0ACT2 Confidence 99.91% Date Thu Jan 5 11:18:57 GMT 2012 Rank 7 Aligned Residues 193 % Identity 16% Template c2pbxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hemagglutinin/protease regulatory protein; PDBTitle: vibrio cholerae hapr Resolution 2.20 Å

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		1	.	.	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		M	A	K	R	T	K	A	E	.	.	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		I	E	K	R	P	R	T	R	L	S	P	Q	K	R	K	L	Q	L	M	E	I	A	L	E	V	F	A	K	R	G	I	G	R	G	G	H	A	D	I	A	E	I	A	Q	V	S	V	A	T	V	F	N	Y	F	P	T	R	E	D	L	V	D	D	V	L	N	F	V	V	R	Q	Y	S	N	F	L	T	D	H	I
Template Known Secondary structure																																T	T	S											T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	E	H	D	P	F	Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D
Query Conservation
Alig confidence			.																													.	.	.	.
Template Conservation			.																													.	.	.	.
Template Sequence		D	.	L	D	L	D	V	K	T	N	L	Q	T	L	C	K	E	M	V	K	L	A	M	T	D	C	H	W	L	K	.	.	.	.	V	W	F	E	W	S	A	S	T	R	D	E	V	W	P	L	F	V	S	T	N	R	T	N	Q	L	L	I	R	N	M	F	M	K	A	M	E	R	G	E	L	C	E	K	H	D
Template Known Secondary structure			.	T	T	S																		T	T	T						.	.	.	.							T				T	T	T								T																	T	T		S		T	T	S
Template Predicted Secondary structure			.																													.	.	.	.
Template SS confidence
		85		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	V	M	I	I	I	D	G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	N	M	A	S	L	F	H	G	I	F	Y	S	I	F	L	Q	V	N	R	L	G	E	Q	E	A	V	Y	K	L	A	D	S	Y	L	N	M	L	C
Template Known Secondary structure																							T																T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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