Job Description P0ACT2 Confidence 99.85% Date Thu Jan 5 11:18:57 GMT 2012 Rank 50 Aligned Residues 185 % Identity 14% Template c2o7tA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	R	A	D	A	L	K	R	R	E	H	I	I	T	T	T	C	N	L	Y	R	T	H	H	H	D	S	L	T	X	E	N	I	A	E	Q	A	G	V	G	V	A	T	L	Y	R	N	F	P	D	R	F	T	L	D	X	A	C	A	Q	Y	L	F	N	V	V	I	S	L	Q	L	Q	A	I	S	T	F	P	T	D
Template Known Secondary structure																								S		G	G	G											T											S	S																											G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		P	E	G	V	W	T	S	F	N	Q	L	L	F	D	R	G	L	G	S	.	.	.	.	.	.	.	.	.	L	V	P	A	L	A	P	E	S	L	D	D	L	P	D	E	V	S	A	L	R	R	T	T	E	K	N	T	T	T	L	I	N	L	A	K	Q	H	G	L	V	H	H	D	I	A	P	G	T	Y	I	V
Template Known Secondary structure																T	T				.	.	.	.	.	.	.	.	.								S	S	G	G	G	S																									T	T	S	S		T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	D	G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		G	L	I	T	.	.	.	.	.	I	S	R	P	P	I	T	A	L	A	T	I	S	E	N	S	H	K	A	L	L	G	L	Y	L	S	G	L	K	H
Template Known Secondary structure						.	.	.	.	.		T	S				G	G	G			S	S
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		152	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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