Job Description P0ACT2 Confidence 99.86% Date Thu Jan 5 11:18:57 GMT 2012 Rank 44 Aligned Residues 183 % Identity 16% Template c2fq4A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of the transcriptional regulator (tetr family)2 from bacillus cereus Resolution 1.79 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q
Query Conservation
Alig confidence																																																																.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		R	N	I	E	T	Q	K	A	I	L	S	A	S	Y	E	L	L	L	E	S	G	F	K	A	V	T	V	D	K	I	A	E	R	A	K	V	S	K	A	T	I	Y	K	W	W	P	N	K	A	A	V	V	X	D	G	F	L	S	A	A	A	A	.	.	.	.	.	.	R	L	P	V	P	D	T	G	S	A	L	N
Template Known Secondary structure																							T	T	T											T											S	S													S			.	.	.	.	.	.								S
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		D	I	L	I	H	A	T	S	L	A	N	F	L	I	S	R	E	G	T	.	.	.	I	I	N	E	L	V	G	E	G	Q	F	D	S	K	L	A	E	E	Y	R	V	R	Y	F	Q	P	R	R	L	Q	A	K	Q	L	L	E	K	G	I	K	R	G	E	L	K	E	N	L	D	I	E	L	S	I	D	L	I	Y
Template Known Secondary structure																S	T	T	T	T	.	.	.										T	T												T																		T	T		S		T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P
Query Conservation
Alig confidence					.	.	.													.
Template Conservation					.	.	.													.
Template Sequence		G	P	I	.	.	.	F	Y	R	L	L	V	T	G	E	K	L	D	.	D	S	Y	V	H	D	L	V	I	N	A	F	E	G	I	R	L
Template Known Secondary structure					.	.	.						T	T						.															S	S
Template Predicted Secondary structure					.	.	.													.
Template SS confidence
		160	.	.				.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions