Job Description P0ACT2 Confidence 99.75% Date Thu Jan 5 11:18:57 GMT 2012 Rank 104 Aligned Residues 179 % Identity 15% Template c2fd5A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: the crystal structure of a transcriptional regulator from pseudomonas2 aeruginosa pao1 Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	R	T	K	A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G
Query Conservation
Alig confidence						.	.	.	.																																																																				.	.
Template Conservation						.	.	.	.																																																																				.	.
Template Sequence		M	S	D	K	.	.	.	.	K	T	Q	T	R	A	R	I	L	G	A	A	T	Q	A	L	L	E	R	G	A	V	E	P	S	V	G	E	V	M	G	A	A	G	L	T	V	G	G	F	Y	A	H	F	Q	S	K	D	A	L	M	L	E	A	F	E	Q	L	L	G	K	R	R	E	L	L	G	.	.	E	L	D
Template Known Secondary structure						.	.	.	.																				T	T	T	S										T	T			G	G	G	G	G	G	T		S																							.	.	T	S
Template Predicted Secondary structure						.	.	.	.																																																																				.	.
Template SS confidence
		1	.	.	.					.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	H	D	P	F	Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D
Query Conservation
Alig confidence																																														.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		P	G	L	S	G	K	E	R	R	A	L	A	A	A	F	Y	L	S	R	K	H	R	D	A	Q	V	D	A	G	C	P	L	P	A	T	L	A	E	V	A	R	L	P	E	.	.	.	.	.	.	G	F	R	E	V	L	S	R	H	V	E	I	M	V	T	S	L	A	E	S	P	E	.	.	.	.	.	E	T	D
Template Known Secondary structure		T	T	S														S						T	T		S	S	S			S					G	G	G	G	G	G	S			.	.	.	.	.	.																			S	S	G	G	.	.	.	.	.	G
Template Predicted Secondary structure																																														.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	M	I	I	I	D	G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		V	A	L	A	D	L	V	L	M	I	G	G	L	A	L	A	R	A	L	G	P	G	.	.	.	.	.	E	L	S	D	R	V	L	R	A	A	K	Q	A	V
Template Known Secondary structure																						S	S	.	.	.	.	.													T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions