Job Description P0ACT2 Confidence 99.86% Date Thu Jan 5 11:18:57 GMT 2012 Rank 39 Aligned Residues 187 % Identity 17% Template c1zkgB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family (tm1030)2 from thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	.	A	G	L	E	H	D	P	F	Q	Q	L	R
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		K	R	D	A	I	L	K	A	A	V	E	V	F	G	K	K	G	Y	D	R	A	T	T	D	E	I	A	E	K	A	G	V	A	K	G	L	I	F	H	Y	F	K	N	K	E	E	L	Y	Y	Q	A	Y	X	S	V	T	E	K	L	Q	K	E	F	E	N	F	L	X	K	N	R	N	R	D	I	F	D	F	X	E
Template Known Secondary structure																																T	S									S	S	S																												T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D	G	A	F
Query Conservation
Alig confidence																			.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		R	W	I	E	K	K	L	E	Y	S	A	S	H	P	E	E	A	.	.	.	.	.	D	F	L	I	T	L	V	S	V	D	E	G	L	R	K	R	I	L	L	D	L	E	K	S	Q	R	V	F	F	D	F	V	R	E	K	L	K	D	L	D	L	A	E	D	V	T	E	E	I	A	L	K	F	L	X	W	F	F
Template Known Secondary structure																			.	.	.	.	.				G	G	G	T	T	S																												T	T	S		B		T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	.	.	.	.	.	.	.	.	.	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	F	E	E	V	Y	L	R	T	Y	Q	G	K	P	E	L	L	K	R	D	X	N	T	L	V	E	E	V	K	V	X	L	R	I	L	K	K	G	X	T	K
Template Known Secondary structure													T	T																												B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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