Job Description P0ACT2 Confidence 99.81% Date Thu Jan 5 11:18:57 GMT 2012 Rank 85 Aligned Residues 172 % Identity 14% Template c1zk8A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator from bacillus cereus2 atcc 14579 Resolution 2.15 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q	Q	L	R	E
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		T	L	Q	K	I	V	E	T	A	A	E	I	A	D	A	N	G	V	Q	E	V	T	L	A	S	L	A	Q	T	L	G	V	R	S	P	S	L	Y	N	H	V	K	G	L	Q	D	V	R	K	N	L	G	I	Y	G	I	K	K	L	H	N	R	L	E	E	A	A	E	.	.	D	K	R	X	D	E	A	I	H	A
Template Known Secondary structure																			G	G	G											T	S						T	T	T		S	S																									T	.	.	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D	G	A	F	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		L	G	E	A	Y	V	A	F	V	R	K	H	P	G	L	Y	E	A	T	F	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	R	K	A	G	D	G	I	V	K	L	C	L	Q	V	L	Q	Q	Y	G	L	E	G	E	.	N	A	L	H	A	T	R	G	F	R	S	I	C	H
Template Known Secondary structure																				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			G	G	G	T					.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	I	V	Q	N	W	L	M	N	M	.	.	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		G	F	A	S	I	E	Q	Q	G	G	F	G	L	P	L	D	L	D	I	S	L	H	V	L	L	E	T	F	I	K	G	L	R
Template Known Secondary structure										T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions