Job Description P0ACT2 Confidence 99.76% Date Thu Jan 5 11:18:57 GMT 2012 Rank 101 Aligned Residues 189 % Identity 12% Template c1z0xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family from2 enterococcus faecalis v583 Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	.	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q	Q	L	R
Query Conservation																	.
Alig confidence																	.																																													.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		S	K	D	T	I	I	A	A	A	F	S	L	L	E	K	S	P	T	L	E	Q	L	S	X	R	K	V	A	K	Q	L	G	V	Q	A	P	A	I	Y	W	Y	F	K	N	K	Q	A	L	L	Q	S	X	A	E	A	I	E	E	H	F	.	.	.	.	.	.	Q	E	P	A	L	C	G	E	W	Y	S	D	L	L
Template Known Secondary structure		S															S			G	G	G											T	S							T	T		S	S															T		.	.	.	.	.	.							S
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	X	E	N	Y	Y	D	L	Y	Q	Q	F	P	C	A	V	A	I	E	I	Q	T	V	P	A	Y	P	Q	R	L	R	H	L	N	Q	X	X	G	I	L	R	E	A	G	F	S	P	E	X	T	H	L	A	V	T	S	L	Q	H	L	L	F	G	X	I	X	D	A	T	E	E	K	Q	L	V	S	Q	V	L
Template Known Secondary structure														S	T	T							T	S				S																	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		N	N	L	D	L	D	V	V	M	I	I	I	D	G	A	F	S	G	.	.	.	.	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P	D	E	N
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		N	G	D	D	Y	L	K	E	Q	V	L	H	X	K	Q	Y	V	S	D	N	E	L	T	Y	X	E	E	S	I	Q	F	H	S	I	H	Q	K	S	A	F	I	Q	A	V	K	T	Y	L	D	G	L	Q	A	D	N	T
Template Known Secondary structure		T	T																		T	T									T			G	G	G	S																T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions