Job Description P0AA43 Confidence 98.79% Date Thu Jan 5 11:11:52 GMT 2012 Rank 21 Aligned Residues 142 % Identity 20% Template d2ey4a2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 2.11

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																				.	.																										.
Query SS confidence																																		.																				.	.																										.
Query Sequence		Y	F	M	L	N	K	P	Q	G	Y	V	C	S	T	D	D	P	D	H	P	T	V	L	Y	F	L	D	E	P	V	A	W	.	K	L	H	A	A	G	R	L	D	I	D	T	T	G	L	V	L	M	T	.	.	D	D	G	Q	W	S	H	R	I	T	S	P	R	H	H	C	E	K	T	Y	L	V	T	L	E	.
Query Conservation																																		.																				.	.																										.
Alig confidence															.	.	.	.	.	.	.													.																				.	.										.	.	.	.													.
Template Conservation															.	.	.	.	.	.	.																																												.	.	.	.
Template Sequence		V	I	N	L	D	K	P	P	G	P	T	S	H	.	.	.	.	.	.	.	E	V	V	A	W	I	K	K	I	L	N	L	E	K	A	G	H	G	G	T	L	D	P	K	V	S	G	V	L	P	V	A	L	E	K	A	T	R	V	V	Q	A	L	.	.	.	.	L	P	A	G	K	E	Y	V	A	L	M	H	L
Template Known Secondary structure									S	S	S				.	.	.	.	.	.	.										T	T		S					S	S				T	T										G	G	G	G	G	G					.	.	.	.	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.																																												.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.
			138	.	140	.	.	.	.	.	.	.															.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.
Predicted Secondary structure		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Query SS confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Query Sequence		.	S	P	V	A	D	D	T	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	G	V	Q	L	H	N	E	K	D	L	T	K	P	A	V	L	E	V	I	T	P	T	Q	V	R	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A	V	G	N	.	.	.	.	.	.	H
Query Conservation		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	D	V	P	E	D	K	I	I	Q	V	M	K	E	F	E	G	E	I	I	Q	R	P	P	L	R	S	A	V	K	R	R	L	R	T	R	K	V	Y	Y	I	E	V	L	E	I	E	G	R	D	V	L	F	R	V	G	V	E	A	G	T	Y	I	R	S	L	I	H	H	I	G	L	A	L	G	V	G	A	H
Template Known Secondary structure		S	S													T	T	S									S	S	S		S																			T	T										T	T														T	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	L	H	R	E	R	I	G	G	I	T	L	D	A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	E	L	R	R	T	R	S	G	P	F	K	E	D	E	T	L
Template Known Secondary structure											T	T			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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