Job Description P0AA43 Confidence 98.61% Date Thu Jan 5 11:11:52 GMT 2012 Rank 25 Aligned Residues 158 % Identity 22% Template d1r3ea2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 2.10

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																																															.	.
Query SS confidence																																	.																																															.	.
Query Sequence		Y	F	M	L	N	K	P	Q	G	Y	V	C	S	T	D	D	P	D	H	P	T	V	L	Y	F	L	D	E	P	V	A	.	W	K	L	H	A	A	G	R	L	D	I	D	T	T	G	L	V	L	M	T	D	D	G	Q	W	S	H	R	I	T	S	P	R	H	H	C	E	K	T	Y	L	V	T	L	E	S	.	.
Query Conservation																																	.																																															.	.
Alig confidence															.	.	.	.	.	.	.												.																								.	.																						.	.
Template Conservation															.	.	.	.	.	.	.																																				.	.
Template Sequence		I	L	V	A	Y	K	P	K	G	P	T	S	H	.	.	.	.	.	.	.	D	V	V	D	E	V	R	K	K	L	K	T	R	K	V	G	H	G	G	T	L	D	P	F	A	C	G	V	L	I	I	G	V	N	Q	.	.	G	T	R	I	L	E	F	Y	K	D	L	K	K	V	Y	W	V	K	M	R	L	G	L
Template Known Secondary structure									S	S	S				.	.	.	.	.	.	.										T	T		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	G	T	T	S											T
Template Predicted Secondary structure															.	.	.	.	.	.	.																																				.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																			139	140	.	.	.	.	.	.	.																														.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	D	D	T	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	G	V	Q	L	H	N	E	K	D	L	T	K	P	A	V	L	E	V	I	T	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		I	T	E	T	F	D	I	T	G	E	V	V	E	E	R	E	C	N	V	T	E	E	E	I	R	E	A	I	F	S	F	V	G	E	Y	D	Q	V	P	P	A	Y	S	A	K	K	Y	K	G	E	R	L	Y	K	L	A	R	E	G	K	I	I	N	L	P	P	K	R	V	K	I	F	K	I	W	D	V	N	I	E
Template Known Secondary structure				S	S	S	B	T	T	S																					S	S	S									S	S	S	S				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		P	T	Q	V	R	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A	V	G	N	H	V	.	.	.	.	.	.	V	E	L	H	R	E	R	I	G	G	I	T	L	D	A	D	L	A	P	G	E	Y	R	P	L	T	E	E	E	I	A	S	V	V
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																							.	.	.
Template Conservation																																																									.	.	.
Template Sequence		G	R	D	V	S	F	R	V	E	V	S	P	G	T	Y	I	R	S	L	C	M	D	I	G	Y	K	L	G	C	G	A	T	A	V	E	L	V	R	E	S	V	G	P	H	T	I	E	E	S	L	N	V	F	E	A	.	.	.	A	P	E	E	I	E	N	R	I
Template Known Secondary structure		T	T										T	T														T	T	S													T	T			G	G	G		B		T	T	T	S	.	.	.
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions