Job Description P0AA43 Confidence 98.13% Date Thu Jan 5 11:11:52 GMT 2012 Rank 33 Aligned Residues 142 % Identity 16% Template c3uaiA_ PDB info PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae Resolution 3.06 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																					.	.																										.
Query SS confidence																																	.																					.	.																										.
Query Sequence		Y	F	M	L	N	K	P	Q	G	Y	V	C	S	T	D	D	P	D	H	P	T	V	L	Y	F	L	D	E	P	V	A	.	W	K	L	H	A	A	G	R	L	D	I	D	T	T	G	L	V	L	M	T	.	.	D	D	G	Q	W	S	H	R	I	T	S	P	R	H	H	C	E	K	T	Y	L	V	T	L	E	.
Query Conservation																																	.																					.	.																										.
Alig confidence															.	.	.	.	.	.	.												.																					.	.														.	.	.	.									.
Template Conservation															.	.	.	.	.	.	.																																																.	.	.	.
Template Sequence		V	I	N	L	D	K	P	S	N	P	S	S	H	.	.	.	.	.	.	.	E	V	V	A	W	I	K	R	I	L	R	C	E	K	T	G	H	S	G	T	L	D	P	K	V	T	G	C	L	I	V	C	I	D	R	A	T	R	L	V	K	S	Q	Q	G	A	G	.	.	.	.	K	E	Y	V	C	I	V	R	L
Template Known Secondary structure									S	S	S				.	.	.	.	.	.	.													S					S			S	S	S	S										G	G	G	G	G	G						S	S		.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.																																																.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.								.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.
				138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.													.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.
Predicted Secondary structure		.	.																																.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence		.	.																																.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		.	.	S	P	V	A	D	D	T	A	E	Q	F	A	K	G	V	Q	L	H	N	E	K	D	L	T	K	P	A	V	L	E	V	.	.	.	.	.	.	.	.	.	.	.	.	I	T	P	T	Q	V	R	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A	V	G	N	.	.	.	.	.	.	H	V
Query Conservation		.	.																																.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence		.	.																																.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	A	L	K	D	E	K	D	L	G	R	S	L	E	N	L	T	G	A	L	F	Q	R	P	P	L	K	R	Q	L	R	V	R	T	I	Y	E	S	N	L	I	E	F	D	N	K	R	N	L	G	V	F	W	A	S	C	E	A	G	T	Y	M	R	T	L	C	V	H	L	G	M	L	L	G	V	G	G	H	M
Template Known Secondary structure		S	S			S	S	T										T																													T	T	T	T										T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	H	R	E	R	I	G	G	I	T	L	D	A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	L	R	R	V	R	S	G	A	L	S	E	N	D	N	M
Template Known Secondary structure										T	T			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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