Job Description P0AA43 Confidence 92.13% Date Thu Jan 5 11:11:52 GMT 2012 Rank 47 Aligned Residues 65 % Identity 14% Template c3izbD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein rps4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		3	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		L	D	K	F	I	A	Q	Q	L	G	V	S	.	.	R	A	I	A	G	R	E	I	R	G	N	R	V	T	V	D	G	E	I	V	R	N	A	A	F	K	L	L	P	E	H	D	V	A	Y	D	G	N	P	L	A	Q	Q	H	G	P	R	Y	F	M	L	N	K	P	Q	G	Y	V	C
Query Conservation														.	.
Alig confidence														.	.																																					.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		L	I	V	F	L	R	N	R	L	K	Y	A	L	N	G	R	E	V	K	A	I	L	M	Q	R	H	V	K	V	D	G	K	V	R	T	D	T	T	Y	P	A	G	F	M	D	V	I	T	L	D	.	.	.	.	.	.	A	T	N	E	N	F	R	L	V	Y	D	V	K	G	R	F	A
Template Known Secondary structure												S				S	S	T	T						T	T					T	T						T	T					T	T							.	.	.	.	.	.	S	S										S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions