Job Description P0AA43 Confidence 97.78% Date Thu Jan 5 11:11:52 GMT 2012 Rank 36 Aligned Residues 59 % Identity 19% Template c1s1hD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s9-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure														.																																.	.
Query SS confidence														.																																.	.
Query Sequence		R	L	D	K	F	I	A	Q	Q	L	G	V	.	S	R	A	I	A	G	R	E	I	R	G	N	R	V	T	V	D	G	E	I	V	R	N	A	A	F	K	L	L	P	E	.	.	H	D	V	A	Y	D	G	N	P	L	A	Q	Q	H	G	P
Query Conservation														.																																.	.
Alig confidence														.																																.	.
Template Conservation
Template Sequence		R	L	Q	T	Q	V	Y	K	L	G	L	A	K	S	V	H	H	A	R	V	L	I	T	Q	R	H	I	A	V	G	K	Q	I	V	N	I	P	S	F	M	V	R	L	D	S	E	K	H	I	D	F	A	P	T	S	P	F	G	G	A	R	P
Template Known Secondary structure		B									T	S	S	S	S											T		B			T	T						T	T		B			T	T					B		S	S				T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions