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Job DescriptionP32721
Confidence97.12%DateThu Jan 5 11:50:44 GMT 2012
Rank142Aligned Residues154
% Identity15%Templated1v5wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50...... ...60.........70.........80.........90.........100.
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Query Sequence  VYPGEIHALLGENGAGKSTLMKVLSGIHE. . . . . . PTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENL
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Template Sequence  IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDI. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
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TT
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BTTTB


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   116...120.........130.........140.........150.........160.........170...
 
   102.......110.........120.........130.........140.........150.........160.........170
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Query Sequence  YIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMD. . . . . . . . . . .
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Template Sequence  . . . . . . . . . . ADRFNVDHDAVLDN. . . . . . . . . VLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFS
Template Known Secondary structure  ..........TT

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STTS
SSTSGGG

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   174.....180....... ..190.........200.........210.........220.........230....
 
   171........180.........190. ........200.........210.........220..
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Query Sequence  . EPTSSLTNKEVDYLFLIMNQL. RKEGTAIVYISHKLAEIRRICDRYTVMKDGS
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Template Sequence  GRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMGHILAHASTTRISLRKGR
Template Known Secondary structure  GGG
T




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   235....240.........250.........260.........270.........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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