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Job DescriptionP32721
Confidence100.00%DateThu Jan 5 11:50:44 GMT 2012
Rank3Aligned Residues460
% Identity20%Templatec3ozxA_
PDB info PDB header:hydrolase, translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GIGKSFGPV. HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLGIGIIYQE
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Template Sequence  EVIHRYKVNGFKLFGLP. TPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDP. . NSKVGKDEVLKRFRGKEIYNYFKE
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Query Sequence  L. . . . . SVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLD
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Template Sequence  LYSNELKIVHKIQYVEYASKFLK. . . . GTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLRE
Template Known Secondary structure  TT



S
TTGGGTT

....SB

SS
TT
GGGTTSBGGG

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Query Sequence  AKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVG
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Template Sequence  ADVYIFDQPSSYLDVRERMNMAKAIRELL. KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLK
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Query Sequence  RELQNRFNAMKENVSNLAHE. . TVFEVRNVTSRDRK. KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEI
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Template Sequence  GYLPAENMKIRPDEIKFMLKLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSV
Template Known Secondary structure  TTTTT
SSS



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TT

TT


TTSSTTSS

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   310.........320.........330.........340.........350.........360.........370.........380.........
 
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Query Sequence  RLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC
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Template Sequence  TPEKQI. . . . . . . . . . . . . LSYKPQR. . . IFPNYDGTVQQYLENASKDALSTSSWF. . . . . . . . . . . . FEEVTKRLNLH.
Template Known Secondary structure  SS


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SSB
SSTT
TTS............TTTTTTGG.
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   400..... ....410.. .......420.........430......... 440.........450
 
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Query Sequence  HSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADD. GKVILMVSSELPEIITVCDRI
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Template Sequence  RLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRI
Template Known Secondary structure  G
TTSBGGG

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SSTTTT

TT

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   451........460.........470.........480.........490.........500.........510.........520.........530
 
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Query Sequence  AVFCEGRLTQILTNRDDMSEEEIMAWAL
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Template Sequence  IVFK. GEPEKAGLATSPVTLKTGMNEFL
Template Known Secondary structure  .TTT


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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