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Job DescriptionP32721
Confidence100.00%DateThu Jan 5 11:50:44 GMT 2012
Rank16Aligned Residues225
% Identity30%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YISMAGIGKSFGPV. . . . HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKL. . AA
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Template Sequence  MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKA
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  QLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAK
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Template Sequence  RRQIGMIFQHFNLLSSRTVFGNVAL. . . . . . . PLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIAR
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   81........90.........100..... ....110.........120.........130.........140.........150...
 
   159160.........170.........180.........190.... .....200.........210.........220.........230......
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Query Sequence  TLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE. GTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDD
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Template Sequence  ALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHP
Template Known Secondary structure  T

SSGGGSS


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   154.....160.........170.........180.........190.........200.........210.........220.........230..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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