Job Description P32721 Confidence 99.30% Date Thu Jan 5 11:50:44 GMT 2012 Rank 77 Aligned Residues 289 % Identity 14% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	L	T	V	Y	P	G	E	I	H	A	L	L	G	E	N	G	A	G	K	S	T	L	M	K	V	L	S	G	I	H	E	P	T	K	G	T	I	T	I	N	N	I	S	Y	N	K	L	D	H	K	L	A	A	Q	L	G	I	G	I	I	Y	Q	E	L	S	V	I	D	E	L	T	V	L	E	N	L	Y	I
Query Conservation
Alig confidence																																																									.	.	.
Template Conservation																																																									.	.	.
Template Sequence		G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	.	.	.	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I
Template Known Secondary structure		S	S	S	S			T	T	S							S	T	T	S	S														T	T	T								S	S											.	.	.		T			G	G	G							S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.				.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																					130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		G	R	H	L	T	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	G	V	N	I	I	D	W	R	E	M	R	V	R	A	A	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	R	V	G	L	K	V	D	.	L	D	E	K	V	A	N	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K
Template Known Secondary structure							T	T	S	S									G	G	G											T	T																T	T	T											T	T						S
Template Predicted Secondary structure
Template SS confidence
		1129	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																																																							.	.	.	.	.	.
Query SS confidence																				.	.																																																							.	.	.	.	.	.
Query Sequence		S	I	S	H	K	Q	M	L	E	I	A	K	T	L	M	L	D	A	.	.	K	V	I	I	M	D	E	P	T	S	S	L	T	N	K	E	V	D	Y	L	F	L	I	M	N	Q	L	R	K	E	G	T	A	I	V	Y	I	S	H	K	L	A	E	I	R	R	I	C	D	R	Y	T	V	M	.	.	.	.	.	.
Query Conservation																				.	.																																																							.	.	.	.	.	.
Alig confidence																				.	.											.														.	.	.	.																			.								.	.	.	.	.	.
Template Conservation																																.														.	.	.	.																			.
Template Sequence		E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	.	L	Y	G	E	G	I	N	F	Y	G	E	L	V	.	.	.	.	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	.	K	G	E	K	I	G	Q	G	K	A	N	A	T
Template Known Secondary structure			T	T															S	S	S		T	T								.		T	T	T										.	.	.	.						T	T	S	S				T	T					.	T	T
Template Predicted Secondary structure																																.														.	.	.	.																			.
Template SS confidence
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.		.	.	.	.	.	.	.	1270	.	.	.	.	.					.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.		.	.	.	.	.	.	1300	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																										.	.	.	.																																									.	.
Query SS confidence																										.	.	.	.																																									.	.
Query Sequence		K	D	G	S	S	V	C	S	G	I	V	S	D	V	S	N	D	D	I	V	R	L	M	V	.	.	.	.	G	R	E	L	Q	N	R	F	N	A	M	K	E	N	V	S	N	L	A	H	E	T	V	F	E	V	R	N	V	T	S	R	D	R	K	K	V	R	D	I	.	.	S	F	S	V	C	R	G	E	I	L
Query Conservation																										.	.	.	.																																									.	.
Alig confidence																										.	.	.	.																																			.						.	.
Template Conservation																																																																.
Template Sequence		A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R	E	L	L	L	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	.	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V
Template Known Secondary structure					T	T	S																																S	S	T	T					T	T													S			.							S	S	S	S			T	T	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		1307	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.		.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	A	G	L	V	G	S	G	R	T	E	L	M	N	C	L	F	G	V	D	K	R	A	G	G	E	I	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F
Template Known Secondary structure						S	T	T	S	S														T	S	S
Template Predicted Secondary structure
Template SS confidence
		2063	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions