Job Description P32721 Confidence 100.00% Date Thu Jan 5 11:50:44 GMT 2012 Rank 4 Aligned Residues 441 % Identity 22% Template c3bk7A_ PDB info PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii Resolution 2.80 Å

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		5	.	.	.	.	10	.									.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.						.																																																									.	.	.
Query SS confidence									.	.	.	.	.	.	.	.						.																																																									.	.	.
Query Sequence		Y	I	S	M	A	G	I	.	.	.	.	.	.	.	.	G	K	S	F	G	.	P	V	H	A	L	K	S	V	N	L	T	V	Y	P	G	E	I	H	A	L	L	G	E	N	G	A	G	K	S	T	L	M	K	V	L	S	G	I	H	E	P	T	K	G	T	I	T	I	N	N	I	S	Y	N	K	L	.	.	.
Query Conservation									.	.	.	.	.	.	.	.						.																																																									.	.	.
Alig confidence									.	.	.	.	.	.	.	.						.											.																																														.	.	.
Template Conservation																																	.
Template Sequence		A	I	S	I	V	N	L	P	E	Q	L	D	E	D	C	V	H	R	Y	G	V	N	A	F	V	L	Y	R	L	P	I	.	V	K	D	G	M	V	V	G	I	V	G	P	N	G	T	G	K	T	T	A	V	K	I	L	A	G	Q	L	I	P	N	L	C	E	D	N	D	S	W	D	N	V	I	R	A	F	R	G
Template Known Secondary structure										T	T	G	G	G	S						S	T	T										.			T	T	S								T	T	S	S									T	T	S	S				T	T	T	T											T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
									73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	.	.	D	H	K	L	A	A	Q	L	G	I	G	I	I	Y	Q	E	L	S	V	I	D	E	L	.	.	.	T	V	L	E	N	L	Y	I	G	R	H	L	T	K	K	I	C	G	V	N	I	I	D	W	R	E	M	R	V	R	A	A	M	M	L	L	R	V	G	L	K	V	D	L	D	E	K
Query Conservation		.	.	.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	L	Q	N	Y	F	E	R	L	K	N	G	E	I	R	P	V	V	K	P	Q	Y	V	D	L	L	P	K	A	V	K	G	K	V	R	E	L	L	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	V	G	K	F	E	E	V	V	K	E	L	E	L	E	N	V	L	D	R	E
Template Known Secondary structure		S	T											T	S								S		G	G	G	G	G	G	T			S	B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S	S									T	T		T	T	G	G	G	S	B
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	L	S	I	S	H	K	Q	M	L	E	I	A	K	T	L	M	L	D	A	K	V	I	I	M	D	E	P	T	S	S	L	T	N	K	E	V	D	Y	L	F	L	I	M	N	Q	L	R	K	E	G	T	A	I	V	Y	I	S	H	K	L	A	E	I	R	R	I	C	D	R	Y	T	V	M	K	D	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	Q	L	S	G	G	E	L	Q	R	V	A	I	A	A	A	L	L	R	K	A	H	F	Y	F	F	D	E	P	S	S	Y	L	D	I	R	Q	R	L	K	V	A	R	V	I	R	R	L	A	N	E	G	K	A	V	L	V	V	E	H	D	L	A	V	L	D	Y	L	S	D	V	I	H	V	V	Y	G	E	P
Template Known Secondary structure		G	G	G																	S			S							T	T	T	T																			T	T								S										S							S		T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.										.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																		.
Query SS confidence																								.	.	.	.	.	.	.	.	.																																		.
Query Sequence		S	V	C	S	G	I	V	S	D	V	S	N	D	D	I	V	R	L	M	V	G	R	.	.	.	.	.	.	.	.	.	E	L	Q	N	R	F	N	A	M	K	E	N	V	S	N	L	A	H	E	T	V	F	E	V	R	N	V	T	S	R	D	R	K	.	K	V	R	D	I	S	F	S	V	C	R	G	E	I	L
Query Conservation																								.	.	.	.	.	.	.	.	.																																		.
Alig confidence																								.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		G	V	Y	G	I	F	S	K	P	K	G	T	R	N	G	I	N	E	F	L	Q	G	Y	L	K	D	E	N	V	R	F	R	P	Y	E	I	R	F	T	K	L	S	E	R	V	D	V	E	R	E	T	L	V	E	Y	P	R	L	V	K	D	Y	G	S	F	K	L	E	V	E	P	G	E	I	R	K	G	E	V	I
Template Known Secondary structure		T	T																				T			T	T	T	T					S	S							S	T	T	S																			S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	A	G	L	V	G	S	G	R	T	E	L	M	N	C	L	F	G	V	D	K	R	A	G	G	E	I	R	L	N	G	K	D	I	S	P	R	S	P	L	D	A	V	K	K	G	M	A	Y	I	T	E	S	R	R	D	N	G	F	F	P	N	F	S	I	A	Q	N	M	A	I	S	R	S	L	K	D	G	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																					.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																					.	.	.
Template Sequence		G	I	V	G	P	N	G	I	G	K	T	T	F	V	K	M	L	A	G	V	E	E	P	T	E	G	K	V	E	W	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Y	K	P	Q	Y	.	.	.	I	K	A	E	Y	E	G	T	V	Y	E	L	L	S	K	I	D	S	S	K	.	.	.
Template Known Secondary structure							T	T	S	S										T	S	S			S	B	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	.	.	.						S	S	B													.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																					.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.															.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	G	A	M	G	L	F	H	E	V	D	E	Q	R	T	A	E	N	Q	R	E	L	L	A	L	K	C	H	S	V	N	Q	N	I	T	E	L	S	G	G	N	Q	Q	K	V	L	I	S	K	W	L	C	C	C	P	E	V	I	I	F	D	E	P	T	R	G	I	D	V	G	A	K	A	E	I	Y	K	V	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	N	S	N	F	Y	K	T	E	L	L	K	P	L	G	I	I	.	D	L	Y	D	R	N	V	E	D	L	S	G	G	E	L	Q	R	V	A	I	A	A	T	L	L	R	D	A	D	I	Y	L	L	D	E	P	S	A	Y	L	D	V	E	Q	R	L	A	V	S	R	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T					T		T	.	T	T	T	T	S	B	G	G	G																T	S			S							T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
												432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		453	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.			.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure								.																										.	.
Query SS confidence								.																										.	.
Query Sequence		R	Q	L	A	D	D	.	G	K	V	I	L	M	V	S	S	E	L	P	E	I	I	T	V	C	D	R	I	A	V	F	C	.	.	E	G	R	L	T	Q	I	L	T	N
Query Conservation								.																										.	.
Alig confidence								.																										.	.
Template Conservation
Template Sequence		R	H	L	M	E	K	N	E	K	T	A	L	V	V	E	H	D	V	L	M	I	D	Y	V	S	D	R	L	I	V	F	E	G	E	P	G	R	H	G	R	A	L	P	P
Template Known Secondary structure								T	T								S										S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.