Job Description P32721 Confidence 97.02% Date Thu Jan 5 11:50:44 GMT 2012 Rank 147 Aligned Residues 159 % Identity 12% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	Y	P	G	E	I	H	A	L	L	G	E	N	G	A	G	K	S	T	L	M	.	K	V	L	S	G	I	H	E	P	T	K	G	T	I	T	I	N	N	I	S	Y	N	K	L	D	H	K	L	A	A	Q	L	G	I	G	I	I	Y	Q	E	L	S	V	I	D	E	L	T	V	L	E	N	L	Y	I	G	R	H
Query Conservation																							.
Alig confidence																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	G	Y	P	G	G	K	I	I	F	I	D	T	E	N	T	F	R	P	D	R	L	R	D	I	A	D	R	F	N
Template Known Secondary structure				S	S	S								S	S		T												T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	T	B										S	S	S											G	G	G	G	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		L	T	K	K	I	C	G	V	N	I	I	D	W	R	E	M	R	V	R	A	A	M	M	L	L	R	V	G	L	K	V	D	L	D	E	K	V	A	N	L	S	I	S	H	K	Q	M	L	E	I	A	K	T	L	M	L	D	A	K	V	I	I	M	D	E	P	T	S	S	L	T	N	K	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	H	D	A	V	L	D	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	A	R	A	Y	T	S	E	H	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L
Template Known Secondary structure								T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	T	T																S		S	S									S	T							S		G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.																				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
							180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.													.
Query SS confidence		.	.	.	.	.													.
Query Sequence		.	.	.	.	.	E	V	D	Y	L	F	L	I	M	N	Q	L	.	R	K	E	G	T	A	I	V	Y	I	S	H	K	L	A	E	I	R	R	I	C	D	R	Y	T	V	M	K	D	G	S
Query Conservation		.	.	.	.	.													.
Alig confidence		.	.	.	.	.													.
Template Conservation
Template Sequence		A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L	Q	K	I	S	E	E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	I	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R
Template Known Secondary structure																						T	T																S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions