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Job DescriptionP32721
Confidence100.00%DateThu Jan 5 11:50:44 GMT 2012
Rank35Aligned Residues237
% Identity23%Templatec2nq2C_
PDB info PDB header:metal transportChain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TPYISMAGIGKSF. GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLG
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Template Sequence  NKALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQ. . . . . . . . . . . . . . S
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TTTTTT


SSSSTTSS

S
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   2.......10.........20.........30.........40.........50.........60...... .
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  IGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLM
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Template Sequence  IGFVPQFFSSPFAYSVLDIVLMGRSTHINTFAKPK. . . SHDYQVAMQALDYLNLTHLAKREFTSLSGGQRQLILIARAIA
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S



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BGGGGGGS
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...TT
GGGTTSBGGGS
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   68.70.........80.........90.........100.. .......110.........120.........130.........140....
 
   162.......170.........180.........190. ........200.........210.........220.........230.........240
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Query Sequence  LDAKVIIMDEPTSSLTNKEVDYLFLIMNQL. RKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRL
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Template Sequence  SECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFK. FGETRNILTSENLTA
Template Known Secondary structure  TT
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TS

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   145....150.........160.........170.........180.........190.........200........ .210.........220...
 
   241........250.......
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Query Sequence  MVGRELQNRFNAMKENV
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Template Sequence  LFHLPMFEQQAQYKESF
Template Known Secondary structure  TS
TT
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   224.....230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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