Return to main results Retrieve Phyre Job Id

Job DescriptionP32721
Confidence98.03%DateThu Jan 5 11:50:44 GMT 2012
Rank98Aligned Residues170
% Identity17%Templatec2hjgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:gtp-binding protein enga; PDBTitle: the crystal structure of the b. subtilis yphc gtpase in2 complex with gdp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.... .....60.........70.........80.........90.........100.........110.
Predicted Secondary structure 







.


























Query SS confidence 





















.
























































Query Sequence  IHALLGENGAGKSTLMKVLSGI. HEPTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKI
Query Conservation     


 








  
 
 .  
  
 
   
               
  
 
        

 


          
Alig confidence 





















.



















.....................................
Template Conservation   
 


 







 
 
 
                  



.....................................
Template Sequence  VVAIVGRPNVGKSTIFNRIAGERISRIYSSAEWLNYDFNLIDP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
STTSS



TT
SS



.....................................
Template Predicted Secondary structure 










.....................................
Template SS confidence 















































































   5....10.........20.........30.........40.......
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  CGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQL
Query Conservation                        

          








 

 

   
 







  

      
   
  
Alig confidence  ...................................























.












....


Template Conservation  ................................... 
         
   

 

 


.        
    ....  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FLAQIRQQAEIAXDEADVIIFXVN. GREGVTAADEEVA. . . . KIL
Template Known Secondary structure  ...................................
S.TTT
S
....
Template Predicted Secondary structure  ...................................



.





....
Template SS confidence 















































































   68.70.........80.........90. ........100.... ...
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  RKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNV
Query Conservation     
 


 


    
    


  
  
                                            
     
Alig confidence 














...............













































....
Template Conservation       
 


 

 
...............    
   

      


  
 
   
   
   
          ....
Template Sequence  YRTKKPVVLAVNKLD. . . . . . . . . . . . . . . NNIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAEHFKNIPETKYNE. . . .
Template Known Secondary structure  TT

S



...............



SSGGGSS



BTTTTBTTGGG

SS


T....
Template Predicted Secondary structure 





...............



































....
Template SS confidence 















































































   108.110.........120.. .......130.........140.........150.........160........
 
   272.......280.........290.........300.........310....
Predicted Secondary structure 



























Query SS confidence 










































Query Sequence  TSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK
Query Conservation         
  

  
  

   
 
 








  
 
   
Alig confidence  ................


























Template Conservation  ................  






 









 
     
Template Sequence  . . . . . . . . . . . . . . . . EVIQFCLIGRPNVGKSSLVNAXLGEER
Template Known Secondary structure  ................T

STTSSTSTT
Template Predicted Secondary structure  ................














Template SS confidence 










































   174.....180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions