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Job DescriptionP32721
Confidence100.00%DateThu Jan 5 11:50:44 GMT 2012
Rank17Aligned Residues229
% Identity25%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.......
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Query Sequence  MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLA. . .
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Template Sequence  IGXAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEPTRGQIYIEDNLVADPEKGVFVPP
Template Known Secondary structure 
S

STT
TT

STTSSTSS

STTGGGT

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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  AQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA
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Template Sequence  KERDVAXVFQSYALYPHXTVYDNIAF. . . . . . . PLKLRKVPKQEIDKRVREVAEXLGLTELLNRKPRELSGGQRQRVALG
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Query Sequence  KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQL. RKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDD
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Template Sequence  RAIIRRPKVFLXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNKGELQQVGTPDEVYYKP
Template Known Secondary structure  SS

SSTTTT

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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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