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Job DescriptionP32721
Confidence100.00%DateThu Jan 5 11:50:44 GMT 2012
Rank32Aligned Residues227
% Identity25%Templatec2d2fA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50...... ...60.........70.........80...
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Query Sequence  ISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE. . PTKGTITINNISYNKLDHKLAAQLGIG
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Template Sequence  LEIRDLWASIDGETILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENILELSPDERARKGLF
Template Known Secondary structure  TTTT

SSSSST
TT
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TTB
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130....... ..140.........150.........160.
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Query Sequence  IIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKV. . DLDEKVANLSISHKQMLEIAKTLM
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Template Sequence  LAFQYPVEVPGVTIANFLRLALQ. . . . AKLGREVGVAEFWTKVKKALELLDWDESYLSRYLNEGFSGGEKKRNEILQLLV
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   84.....90.........100...... ...110.........120.........130.........140.........150.........
 
   162.......170.........180.........190.........200.........210. ........220.........230......
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Query Sequence  LDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRI. CDRYTVMKDGSSVCSGIVSDVSNDD
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Template Sequence  LEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELE
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   160.........170.........180.........190.........200.........210.........220.........230.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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