 |
Job Description | P0ACN2 | Confidence | 75.63% | Date | Thu Jan 5 11:18:35 GMT 2012 |
Rank | 211 | Aligned Residues | 62 |
% Identity | 27% | Template | d2hgca1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| YjcQ-like
|
Resolution | UNK |
|
 |
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . |  |  |  |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | V | A | L | R | E | G | T | H | R | F | S | D | L | R | R | K | I | G | G | V | S | E | K | M | L | A | Q | S | L | Q | A | L | E | Q | D | G | F | L | N | R | I | A | Y | P | V | V | P | P | H | V | E | . |
. |
. |
Y | S | L | T | P | L | G | E | Q | V | S | E |
Query Conservation |   |
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|   | . | . | . |
|   |
|
|   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |
|
|   |   | . | . | . |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|   |
Template Sequence |   |
I | L | K | E | I | F | E | G | N | T | P | . |
. |
. |
L | S | E | N | D | I | G | V | T | E | D | Q | F | D | D | A | V | N | F | L | K | R | E | G | Y | I | I | G | V | H | Y | S | D | D | R | P | H | L | Y | K | L | G | P | E | L | T | E | K | G | E | N | Y | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S |
| . | . | . |
|
|  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |
|
|  |  | S | S | S | S |  |  |
|
| S | S |
|
|  |  |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|