 |
Job Description | P0ACN2 | Confidence | 98.54% | Date | Thu Jan 5 11:18:35 GMT 2012 |
Rank | 21 | Aligned Residues | 79 |
% Identity | 18% | Template | c2gxgA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator; |
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
|
Resolution | 1.45 Å |
|
 |
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | I | L | V | A | L | R | E | G | T | H | R | F | S | D | L | R | R | K | I | G | G | V | S | E | K | M | L | A | Q | S | L | Q | A | L | E | Q | D | G | F | L | N | R | I | A | Y | P | V | V | P | P | H | V | E | Y | S | L | T | P | L | G | E | Q | V | S | E | K | V | A | A | L | A | D | W | I | E | L | N | L |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |   | . |   |
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | L | V | L | R | A | T | S | D | G | P | K | T | M | A | Y | L | A | N | R | Y | . |
F | V | T | Q | S | A | I | T | A | S | V | D | K | L | E | E | M | G | L | V | V | R | V | R | D | R | E | D | R | R | K | I | L | I | E | I | T | E | K | G | L | E | T | F | N | K | G | I | E | I | Y | K | K | L | A | N | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S |
| B |
|  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
| S | S |
| T | T |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|