Email l.a.kelley@imperial.ac.uk Description P76552 Date Wed Jan 25 15:21:09 GMT 2012 Unique Job ID 4d33e6cdac4bab53

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2hlya1 35.4 33 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Atu2299-like 2 c3qnqD_ 35.0 14 PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system 3 c3pjzA_ 34.3 14 PDB header:transport protein Chain: A: PDB Molecule:potassium uptake protein trkh; PDBTitle: crystal structure of the potassium transporter trkh from vibrio2 parahaemolyticus 4 d1j4na_ 21.8 22 Fold:Aquaporin-like Superfamily:Aquaporin-like Family:Aquaporin-like 5 c3ajvA_ 17.3 16 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: splicing endonuclease from aeropyrum pernix 6 c2ntxB_ 16.3 29 PDB header:signaling protein Chain: B: PDB Molecule:emb cab41934.1; 7 c3ai9X_ 16.0 42 PDB header:transferase Chain: X: PDB Molecule:upf0217 protein mj1640; PDBTitle: crystal structure of duf358 protein reveals a putative spout-class2 rrna methyltransferase 8 c2ka2A_ 15.2 33 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 9 c2ka2B_ 15.2 33 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 10 c2ka1B_ 15.2 33 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 11 c2ka1A_ 15.2 33 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 12 d2qwva1 15.0 25 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF1056-like 13 d2qmma1 13.6 27 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF1056-like 14 d1acca_ 13.1 16 Fold:Anthrax protective antigen Superfamily:Anthrax protective antigen Family:Anthrax protective antigen 15 d1ig8a1 11.7 60 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 16 c2j5dA_ 11.2 32 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles 17 d1fx8a_ 11.1 20 Fold:Aquaporin-like Superfamily:Aquaporin-like Family:Aquaporin-like 18 c1ldaA_ 11.1 20 PDB header:transport protein Chain: A: PDB Molecule:glycerol uptake facilitator protein; PDBTitle: crystal structure of the e. coli glycerol facilitator (glpf) without2 substrate glycerol 19 c3zy6A_ 11.1 29 PDB header:transferase Chain: A: PDB Molecule:putative gdp-fucose protein o-fucosyltransferase 1; PDBTitle: crystal structure of pofut1 in complex with gdp-fucose2 (crystal-form-ii) 20 d1czan1 10.8 50 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 21 c2b2hA_ not modelled 10.2 26 PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) 22 c3op9A_ not modelled 10.0 14 PDB header:transcription regulator Chain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua 23 d1czan3 not modelled 9.9 60 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 24 d1bdga1 not modelled 9.3 60 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 25 d1bg3a3 not modelled 9.2 60 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 26 d1bg3a1 not modelled 9.1 50 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 27 c2k3uA_ not modelled 8.8 37 PDB header:immune system Chain: A: PDB Molecule:chemotaxis inhibitory protein; PDBTitle: structure of the tyrosine-sulfated c5a receptor n-terminus2 in complex with the immune evasion protein chips. 28 c3llqB_ not modelled 8.8 19 PDB header:membrane protein Chain: B: PDB Molecule:aquaporin z 2; PDBTitle: aquaporin structure from plant pathogen agrobacterium tumerfaciens 29 d1v4sa1 not modelled 8.4 50 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 30 c2lmfA_ not modelled 7.2 43 PDB header:antimicrobial protein Chain: A: PDB Molecule:antibacterial protein ll-37; PDBTitle: solution structure of human ll-23 bound to membrane-mimetic micelles 31 c3hm8D_ not modelled 7.0 60 PDB header:transferase Chain: D: PDB Molecule:hexokinase-3; PDBTitle: crystal structure of the c-terminal hexokinase domain of human hk3 32 c2w2eA_ not modelled 6.9 26 PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 33 d1rc2a_ not modelled 6.9 13 Fold:Aquaporin-like Superfamily:Aquaporin-like Family:Aquaporin-like 34 c3p04B_ not modelled 6.6 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 35 c2magA_ not modelled 6.4 35 PDB header:antibiotic Chain: A: PDB Molecule:magainin 2; PDBTitle: nmr structure of magainin 2 in dpc micelles, 10 structures 36 c3c9jD_ not modelled 6.2 21 PDB header:membrane protein Chain: D: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 37 c3c9jA_ not modelled 6.2 21 PDB header:membrane protein Chain: A: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 38 c3c9jB_ not modelled 6.2 21 PDB header:membrane protein Chain: B: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 39 c3c9jC_ not modelled 6.2 21 PDB header:membrane protein Chain: C: PDB Molecule:proton channel protein m2, transmembrane segment; PDBTitle: the crystal structure of transmembrane domain of m2 protein and2 amantadine complex 40 c3ct5A_ not modelled 6.0 14 PDB header:hydrolase Chain: A: PDB Molecule:morphogenesis protein 1; PDBTitle: crystal and cryoem structural studies of a cell wall degrading enzyme2 in the bacteriophage phi29 tail 41 d1u9ya2 not modelled 6.0 38 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 42 d1u7ga_ not modelled 5.9 16 Fold:Ammonium transporter Superfamily:Ammonium transporter Family:Ammonium transporter 43 d1wi9a_ not modelled 5.7 63 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 44 c1ymgA_ not modelled 5.7 26 PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution 45 d1ymga1 not modelled 5.7 26 Fold:Aquaporin-like Superfamily:Aquaporin-like Family:Aquaporin-like 46 d1l8wd_ not modelled 5.6 35 Fold:Variable surface antigen VlsE Superfamily:Variable surface antigen VlsE Family:Variable surface antigen VlsE 47 c3c1iA_ not modelled 5.5 20 PDB header:transport protein Chain: A: PDB Molecule:ammonia channel; PDBTitle: substrate binding, deprotonation and selectivity at the2 periplasmic entrance of the e. coli ammonia channel amtb 48 c1iyjC_ not modelled 5.5 55 PDB header:gene regulation/antitumor protein Chain: C: PDB Molecule:deleted in split hand/split foot protein 1; PDBTitle: structure of a brca2-dss1 complex 49 c1bdgA_ not modelled 5.5 60 PDB header:hexokinase Chain: A: PDB Molecule:hexokinase; PDBTitle: hexokinase from schistosoma mansoni complexed with glucose 50 c1v4sA_ not modelled 5.5 50 PDB header:transferase Chain: A: PDB Molecule:glucokinase isoform 2; PDBTitle: crystal structure of human glucokinase 51 c1ig8A_ not modelled 5.4 60 PDB header:transferase Chain: A: PDB Molecule:hexokinase pii; PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence 52 c2oarA_ not modelled 5.3 26 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl) 53 c3hzqA_ not modelled 5.3 26 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state 54 c3pvpA_ not modelled 5.1 10 PDB header:dna binding protein/dna Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna