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Job DescriptionP39451
Confidence100.00%DateThu Jan 5 12:00:50 GMT 2012
Rank48Aligned Residues307
% Identity20%Templatec3jynA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of pseudomonas syringae pv. tomato dc30002 quinone oxidoreductase complexed with nadph
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKAAVVTKDHH. . . VDVTYKTLRSLKHGEALLKMECCGVCHTDLHVKNGDFG. DKTGVILGHEGIGVVAEVGPGVTSLKP
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Template Sequence  AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV
Template Known Secondary structure  BSS
SSGGG






TT

TSS

SSSSB





TT

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T
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  GDRASVAWFYEGCGHCEYCNSGNETLCRSVKNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKL
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Template Sequence  GDRVAYGTGPLGAYSE. . . . . . . . . . . . . . . . . . . . . . . . . . VHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQT
Template Known Secondary structure  T
SSSSS

SBS..........................GGG

TTS
TT
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   82.......90....... ..100.........110.........120.........130.....
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  SKIRPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGADLAINSHTEDAAKIVQEKTGGAHAAVVTA
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Template Sequence  YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYD
Template Known Secondary structure  S


TT
SSTTST
SST
STTTS
TTT

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   136...140.........150.........160.........170.........180.........190.........200.........210.....
 
   237..240.........250......... 260.........270.........280...... ...290.........300.....
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Query Sequence  VAKAAFNSAVDAVRAGGRVVAVG. . LPPESMSLDIPRLVLDGIEVVGSLVGT. . . . . . . . . RQDLTEAFQFAAEGKVVPK
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Template Conservation                      
                                                 
   
 
   
Template Sequence  GVGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD
Template Known Secondary structure  SS
GGGTT


TT



S

TTTS



S
STTTTSS


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   216...220.........230.........240.........250.........260.........270.........280.........290.....
 
   306 ...310.........320.........330...
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Query Sequence  V. ALRPLADINTIFTEMEEGKIRGRMVID
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Template Sequence  GIEQYALKDAAKAQIELSARRTTGSTILI
Template Known Secondary structure 

GGGTT


S
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   296...300.........310.........320....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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