Job Description P39451 Confidence 100.00% Date Thu Jan 5 12:00:50 GMT 2012 Rank 35 Aligned Residues 315 % Identity 17% Template c3fbgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative arginate lyase; PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.							.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		M	K	A	A	V	V	T	.	.	.	.	.	.	K	D	H	H	V	D	V	T	Y	K	T	L	R	S	L	K	H	G	E	A	L	L	K	M	E	C	C	G	V	C	H	T	D	L	H	V	K	N	G	D	F	G	D	K	T	G	V	I	L	G	H	E	G	I	G	V	V	A	E	V	G	P	G	V	T	S	L
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																											.
Template Conservation																																																									.
Template Sequence		L	K	A	I	G	F	E	Q	P	F	K	L	S	D	G	N	L	F	K	T	F	N	L	D	I	P	E	P	K	V	H	E	I	L	V	K	I	Q	S	I	S	V	N	P	V	D	T	K	Q	R	L	M	D	V	S	.	K	A	P	R	V	L	G	F	D	A	I	G	V	V	E	S	V	G	N	E	V	T	M	F
Template Known Secondary structure							B	S	S				G	G	G																T	T																			T	T	S			S	.	S	S		B															T	T			S
Template Predicted Secondary structure																																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	D	R	A	S	V	A	W	F	Y	E	G	C	G	H	C	E	Y	C	N	S	G	N	E	T	L	C	R	S	V	K	N	A	G	Y	S	V	D	G	G	M	A	E	E	C	I	V	V	A	D	Y	A	V	K	V	P	D	G	L	D	S	A	A	A	S	S	I	T	C	A	G	V	T	T	Y	K	A	V
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	G	D	I	V	Y	Y	S	G	S	P	D	Q	N	G	S	N	A	E	Y	Q	L	I	N	E	R	L	V	A	K	A	P	K	N	I	S	A	E	Q	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	L	T	G	I	T	A	Y	E	T	L	F	D	V	F	G	I	S
Template Known Secondary structure			T	T									T	T	S			S	S	B	S						G	G	G						S	S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S													T	T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	S	K	I	R	P	G	Q	W	I	A	I	Y	G	L	G	G	L	G	N	L	A	L	Q	Y	A	K	N	V	F	N	A	K	V	I	A	I	D	V	N	D	E	Q	L	K	L	A	T	E	M	G	A	D	L	A	I	N	S	H	T	E	D	A	A	K	I	V	Q	E	K	T	G	G	A	H	A	A	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	R	N	E	N	E	G	K	T	L	L	I	I	N	G	A	G	G	V	G	S	I	A	T	Q	I	A	K	A	Y	G	L	R	V	I	T	T	A	S	R	N	E	T	I	E	W	T	K	K	M	G	A	D	I	V	L	N	H	K	E	S	L	L	N	Q	F	K	T	Q	G	I	E	L	V	D	Y	V	F	C
Template Known Secondary structure		S	S					T	T							S	T	T	S													T	T									S											T		S					T	T	S										T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	V	A	K	A	A	F	N	S	A	V	D	A	V	R	A	G	G	R	V	V	A	V	G	L	P	P	E	S	M	.	.	.	.	.	.	.	.	.	.	S	L	D	I	P	R	L	V	L	D	G	I	E	V	V	G	S	L	V	G	T	R	Q	D	L	T	E	A	F	Q	F	A	A	E	G	K	V	V	P
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	N	T	D	M	Y	Y	D	D	M	I	Q	L	V	K	P	R	G	H	I	A	T	I	V	A	F	E	N	D	Q	D	L	N	A	L	K	P	K	S	L	S	F	S	H	E	F	M	F	A	R	P	L	N	Q	T	D	D	M	I	K	H	H	E	Y	L	E	D	I	T	N	K	V	E	Q	N	I	Y	Q	P
Template Known Secondary structure		S	S																						S	S			S	S				G	G	G	G	T	T	T	T								T	T					T	T		T	T	T																T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		305	.		.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure				.			.	.	.
Query SS confidence				.			.	.	.
Query Sequence		K	V	.	A	L	.	.	.	R	P	L	A	D	I	N	T	I	F	T	E	M	E	E	G	K	I	R	G	R	M	V	I	D	F
Query Conservation				.			.	.	.
Alig confidence				.			.	.	.
Template Conservation
Template Sequence		T	T	T	K	V	I	E	G	L	T	T	E	N	I	Y	Q	A	H	Q	I	L	E	S	N	T	M	I	G	K	L	V	I	N	L
Template Known Secondary structure									S															T	T				S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions