Job Description P39451 Confidence 100.00% Date Thu Jan 5 12:00:50 GMT 2012 Rank 56 Aligned Residues 303 % Identity 15% Template c1zsvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12- PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase Resolution 2.30 Å

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		1	.	.	.	.	.	.	.								.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		M	K	A	A	V	V	T	K	.	.	.	.	.	.	.	D	H	H	V	D	V	T	Y	K	T	L	R	S	L	K	H	G	E	A	L	L	K	M	E	C	C	G	V	C	H	T	D	L	H	V	K	N	G	D	F	G	D	K	T	G	V	I	L	G	H	E	G	I	G	V	V	A	E	V	G	P	G	V	T	S
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																																										.	.																				.	.	.
Template Conservation																																																										.	.																				.	.	.
Template Sequence		T	K	T	W	T	L	K	K	H	F	V	G	Y	P	T	N	S	D	F	E	L	K	T	S	E	L	P	P	L	K	N	G	E	V	L	L	E	A	L	F	L	T	V	D	P	Y	M	R	V	A	A	K	R	L	K	E	.	.	G	D	T	M	M	G	Q	Q	V	A	K	V	V	E	S	K	N	V	A	.	.	.
Template Known Secondary structure								S	S			S	S	S			G	G	G													T	T													T						G	G	G	S		T	.	.	T		B													S		T	T	.	.	.
Template Predicted Secondary structure																																																										.	.																				.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	G	D	R	A	S	V	A	W	F	Y	E	G	C	G	H	C	E	Y	C	N	S	G	N	E	T	L	C	R	S	V	K	N	A	G	Y	S	V	D	G	G	M	A	E	E	C	I	V	V	A	D	Y	A	V	K	V	P	D	G	L	D	S	A	A	A	S	S	I	T	C	A	G	V	T	T	Y	K	A
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	K	G	T	I	V	L	A	S	P	G	W	T	T	H	S	I	S	D	G	K	D	L	E	K	L	L	T	E	W	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	P	L	S	L	A	L	G	T	V	G	M	P	G	L	T	A	Y	F	G	L
Template Known Secondary structure		S		T	T									S	B	S						S	T	T						T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		G	G	G	G	G	T	T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	S	K	I	R	P	G	Q	W	I	A	I	Y	G	L	G	G	L	G	N	L	A	L	Q	Y	A	K	N	V	F	N	A	K	V	I	A	I	D	V	N	D	E	Q	L	K	L	A	T	E	M	G	A	D	L	A	I	N	S	H	T	E	D	A	A	K	I	V	Q	E	K	T	G	G	A	H	A	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	I	C	G	V	K	G	G	E	T	V	M	V	N	A	A	A	G	A	V	G	S	V	V	G	Q	I	A	K	L	K	G	C	K	V	V	G	A	V	G	S	D	E	K	V	A	Y	L	Q	K	L	G	F	D	V	V	F	N	Y	K	T	V	E	S	L	E	E	T	L	K	K	A	S	P	D	G	Y	D	C
Template Known Secondary structure			T	T	S				S	S						S	S	T	T	S	T	T											T	T								S	S										T	T		S					T	T	T		S											T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.									260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.							.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		V	T	A	V	A	K	A	A	F	N	S	A	V	D	A	V	R	A	G	G	R	V	V	A	V	G	.	.	.	.	.	.	.	.	L	P	P	E	S	M	S	L	D	I	P	R	L	V	L	D	G	I	E	V	V	G	S	L	V	G	T	.	.	.	.	.	.	R	Q	D	L	T	E	A	F	Q	F	A	A	E
Query Conservation																												.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	D	N	V	G	G	E	F	S	N	T	V	I	G	Q	M	K	K	F	G	R	I	A	I	C	G	A	I	S	T	Y	N	R	T	G	P	L	P	P	G	P	P	P	E	I	V	I	Y	Q	E	L	R	M	E	A	F	V	V	Y	R	W	Q	G	D	A	R	Q	K	A	L	K	D	L	L	K	W	V	L	E
Template Known Secondary structure					S	S										T	T													G	G	G	T	T			S	S													T	T								G	G	G																			T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	K	V	V	P	K	V	.	A	L	R	P	L	A	D	I	N	T	I	F	T	E	M	E	E	G	K	I	R	G	R	M	V	I	D
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		G	K	I	Q	Y	K	E	Y	I	I	E	G	F	E	N	M	P	A	A	F	M	G	M	L	K	G	D	N	L	G	K	T	I	V	K
Template Known Secondary structure		T	S	S										G	G	G										T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions