Job Description P39451 Confidence 100.00% Date Thu Jan 5 12:00:50 GMT 2012 Rank 45 Aligned Residues 308 % Identity 16% Template c1yb5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human zeta-crystallin with bound nadp Resolution 1.85 Å

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		1	.	.	.	.	.	.				.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure									.	.	.								.																																				.	.
Query SS confidence									.	.	.								.																																				.	.
Query Sequence		M	K	A	A	V	V	T	.	.	.	K	D	H	H	V	D	V	.	T	Y	K	T	L	R	S	L	K	H	G	E	A	L	L	K	M	E	C	C	G	V	C	H	T	D	L	H	V	K	N	G	D	F	G	.	.	D	K	T	G	V	I	L	G	H	E	G	I	G	V	V	A	E	V	G	P	G	V	T	S	L
Query Conservation									.	.	.								.																																				.	.
Alig confidence									.	.	.								.																																				.	.
Template Conservation
Template Sequence		M	R	A	V	R	V	F	E	F	G	G	P	E	V	L	K	L	R	S	D	I	A	V	P	I	P	K	D	H	Q	V	L	I	K	V	H	A	C	G	V	N	P	V	E	T	Y	I	R	S	G	T	Y	S	R	K	P	L	L	P	Y	T	P	G	S	D	V	A	G	V	I	E	A	V	G	D	N	A	S	A	F
Template Known Secondary structure								S	S		S	S	G	G	G														T	T																					T		S	S					S	S	B				S											T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	D	R	A	S	V	A	W	F	Y	E	G	C	G	H	C	E	Y	C	N	S	G	N	E	T	L	C	R	S	V	K	N	A	G	Y	S	V	D	G	G	M	A	E	E	C	I	V	V	A	D	Y	A	V	K	V	P	D	G	L	D	S	A	A	A	S	S	I	T	C	A	G	V	T	T	Y	K	A	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	G	D	R	V	F	T	S	S	T	I	S	G	G	Y	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	L	A	A	D	H	T	V	Y	K	L	P	E	K	L	D	F	K	Q	G	A	A	I	G	I	P	Y	F	T	A	Y	R	A	L	I
Template Known Secondary structure			T	T						S			S	S		S	S	B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G						T	T	S						T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																											.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	S	K	I	R	P	G	Q	W	I	A	I	Y	G	L	G	G	L	G	N	L	A	L	Q	Y	A	K	N	V	F	N	A	K	V	I	A	I	D	V	N	D	E	Q	L	K	L	A	T	E	M	G	A	D	L	A	I	N	S	H	T	E	D	A	A	K	I	V	Q	E	K	T	G	G	A	H	A	A	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	A	C	V	K	A	G	E	S	V	L	V	H	G	A	S	G	G	V	G	L	A	A	C	Q	I	A	R	A	Y	G	L	K	I	L	G	T	A	G	T	E	E	G	Q	K	I	V	L	Q	N	G	A	H	E	V	F	N	H	R	E	V	N	Y	I	D	K	I	K	K	Y	V	G	E	K	G	I	D	I	I
Template Known Secondary structure		T	T	S				T	T							T		S	S													T	T								S	S										T	T		S					T	T	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.							.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.
Predicted Secondary structure																																																						.	.	.	.	.	.																					.
Query SS confidence																																																						.	.	.	.	.	.																					.
Query Sequence		T	A	V	A	K	A	A	F	N	S	A	V	D	A	V	R	A	G	G	R	V	V	A	V	G	L	P	P	E	S	M	S	L	D	I	P	R	L	V	L	D	G	I	E	V	V	G	S	L	V	G	T	.	.	.	.	.	.	R	Q	D	L	T	E	A	F	Q	F	A	A	E	G	K	V	V	P	K	V	.	A
Query Conservation																																																						.	.	.	.	.	.																					.
Alig confidence																																																						.	.	.	.	.	.																					.
Template Conservation
Template Sequence		I	E	M	L	A	N	V	N	L	S	K	D	L	S	L	L	S	H	G	G	R	V	I	V	V	G	S	R	G	T	I	E	I	N	P	R	D	T	M	A	K	E	S	S	I	I	G	V	T	L	F	S	S	T	K	E	E	F	Q	Q	Y	A	A	A	L	Q	A	G	M	E	I	G	W	L	K	P	V	I	G	S
Template Known Secondary structure				S																										S						T					T	T	T								G	G	G																				T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	R	P	L	A	D	I	N	T	I	F	T	E	M	E	E	G	K	.	I	R	G	R	M	V	I	D	F
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		Q	Y	P	L	E	K	V	A	E	A	H	E	N	I	I	H	G	S	G	A	T	G	K	M	I	L	L	L
Template Known Secondary structure					G	G	G											S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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