Job Description P39451 Confidence 100.00% Date Thu Jan 5 12:00:50 GMT 2012 Rank 2 Aligned Residues 335 % Identity 55% Template c1rjwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad(+)-dependent alcohol dehydrogenase2 from bacillus stearothermophilus strain lld-r Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure													.																																							.	.
Query SS confidence													.																																							.	.
Query Sequence		M	K	A	A	V	V	T	K	D	H	H	.	V	D	V	T	Y	K	T	L	R	S	L	K	H	G	E	A	L	L	K	M	E	C	C	G	V	C	H	T	D	L	H	V	K	N	G	D	F	G	.	.	D	K	T	G	V	I	L	G	H	E	G	I	G	V	V	A	E	V	G	P	G	V	T	S	L	K	P	G
Query Conservation													.																																							.	.
Alig confidence													.																																							.	.
Template Conservation
Template Sequence		M	K	A	A	V	V	E	Q	F	K	E	P	L	K	I	K	E	V	E	K	P	T	I	S	Y	G	E	V	L	V	R	I	K	A	C	G	V	C	H	T	D	L	H	A	A	H	G	D	W	P	V	K	P	K	L	P	L	I	P	G	H	E	G	V	G	I	V	E	E	V	G	P	G	V	T	H	L	K	V	G
Template Known Secondary structure							B	S	S	T	T	S														T	T																					T		S	S	S				S	S	B				S											T	T			S			T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	S	V	A	W	F	Y	E	G	C	G	H	C	E	Y	C	N	S	G	N	E	T	L	C	R	S	V	K	N	A	G	Y	S	V	D	G	G	M	A	E	E	C	I	V	V	A	D	Y	A	V	K	V	P	D	G	L	D	S	A	A	A	S	S	I	T	C	A	G	V	T	T	Y	K	A	V	K	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	V	G	I	P	W	L	Y	S	A	C	G	H	C	D	Y	C	L	S	G	Q	E	T	L	C	E	H	Q	K	N	A	G	Y	S	V	D	G	G	Y	A	E	Y	C	R	A	A	A	D	Y	V	V	K	I	P	D	N	L	S	F	E	E	A	A	P	I	F	C	A	G	V	T	T	Y	K	A	L	K	V	T
Template Known Secondary structure								S						S		S					T	T		G	G	G		T	T				B	T	T	T	B			S	S	B	S						G	G	G						T	T	S						G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	P	G	Q	W	I	A	I	Y	G	L	G	G	L	G	N	L	A	L	Q	Y	A	K	N	V	F	N	A	K	V	I	A	I	D	V	N	D	E	Q	L	K	L	A	T	E	M	G	A	D	L	A	I	N	S	H	T	E	D	A	A	K	I	V	Q	E	K	T	G	G	A	H	A	A	V	V	T	A	V
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		G	A	K	P	G	E	W	V	A	I	Y	G	I	G	G	L	G	H	V	A	V	Q	Y	A	.	K	A	M	G	L	N	V	V	A	V	D	I	G	D	E	K	L	E	L	A	K	E	L	G	A	D	L	V	V	N	P	L	K	E	D	A	A	K	F	M	K	E	K	V	G	G	V	H	A	A	V	V	T	A	V
Template Known Secondary structure		T			T	T									S	T	T									.			T	T								S											T	T		S					T	T	T	S											S	S							S	S
Template Predicted Secondary structure																										.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	A	F	N	S	A	V	D	A	V	R	A	G	G	R	V	V	A	V	G	L	P	P	E	S	M	S	L	D	I	P	R	L	V	L	D	G	I	E	V	V	G	S	L	V	G	T	R	Q	D	L	T	E	A	F	Q	F	A	A	E	G	K	V	V	P	K	V	A	L	R	P	L	A	D	I	N	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	P	A	F	Q	S	A	Y	N	S	I	R	R	G	G	A	C	V	L	V	G	L	P	P	E	E	M	P	I	P	I	F	D	T	V	L	N	G	I	K	I	I	G	S	I	V	G	T	R	K	D	L	Q	E	A	L	Q	F	A	A	E	G	K	V	K	T	I	I	E	V	Q	P	L	E	K	I	N	E	V
Template Known Secondary structure																										S	S												T	T								S															T	T	S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	E	M	E	E	G	K	I	R	G	R	M	V	I	D	F	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	R	M	L	K	G	Q	I	N	G	R	V	V	L	T	L	E	D
Template Known Secondary structure							T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions