Job Description P39451 Confidence 100.00% Date Thu Jan 5 12:00:50 GMT 2012 Rank 6 Aligned Residues 332 % Identity 23% Template c1pl6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		M	K	A	A	V	V	T	K	D	H	H	V	D	V	T	Y	K	T	L	R	S	L	K	H	G	E	A	L	L	K	M	E	C	C	G	V	C	H	T	D	L	H	V	K	N	G	D	F	G	.	.	.	.	D	K	T	G	V	I	L	G	H	E	G	I	G	V	V	A	E	V	G	P	G	V	T	S	L	K	P
Query Conservation																																																			.	.	.	.
Alig confidence																																																			.	.	.	.
Template Conservation
Template Sequence		N	L	S	L	V	V	H	G	P	G	D	L	R	L	E	N	Y	P	I	P	E	P	G	P	N	E	V	L	L	R	X	H	S	V	G	I	C	G	S	D	V	H	Y	W	E	Y	G	R	I	G	N	F	I	V	K	K	P	X	V	L	G	H	E	A	S	G	T	V	E	K	V	G	S	S	V	K	H	L	K	P
Template Known Secondary structure										T	T														T	T																						S			T	T					S																	T	T			S			T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	A	S	V	A	W	F	Y	E	G	C	G	H	C	E	Y	C	N	S	G	N	E	T	L	C	R	S	V	K	N	A	G	Y	S	V	D	G	G	M	A	E	E	C	I	V	V	A	D	Y	A	V	K	V	P	D	G	L	D	S	A	A	A	S	S	I	T	C	A	G	V	T	T	Y	K	A	V	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	R	V	A	I	E	P	G	A	P	R	E	N	D	E	F	C	K	X	G	R	Y	N	L	S	P	S	I	F	F	C	A	T	P	P	D	D	G	N	L	C	R	F	Y	K	H	N	A	A	F	C	Y	K	L	P	D	N	V	T	F	E	E	G	A	L	I	E	P	L	S	V	G	I	H	A	C	R	R	G
Template Known Secondary structure		T							S				S	S							T	T		G	G	G		T	T				T	T	S	T	T	S					B	S						G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		S	K	I	R	P	G	Q	W	I	A	I	Y	G	L	G	G	L	G	N	L	A	L	Q	Y	A	K	N	V	F	N	A	K	V	I	A	I	D	V	N	D	E	Q	L	K	L	A	T	E	M	G	A	D	L	A	I	N	S	H	T	E	D	A	A	K	I	V	Q	E	K	.	.	.	.	T	G	G	A	H	A	A
Query Conservation																																																																							.	.	.	.
Alig confidence				.																																																																			.	.	.	.
Template Conservation				.
Template Sequence		G	V	.	T	L	G	H	K	V	L	V	C	G	A	G	P	I	G	X	V	T	L	L	V	A	K	A	X	G	A	A	Q	V	V	V	T	D	L	S	A	T	R	L	S	K	A	K	E	I	G	A	D	L	V	L	Q	I	S	K	E	S	P	Q	E	I	A	R	K	V	E	G	Q	L	G	C	K	P	E	V	T
Template Known Secondary structure		T		.		T	T									S													T	T		S							S											T	T		S						S	S															T	S			S
Template Predicted Secondary structure				.
Template SS confidence
		168	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.		.	.	.
Predicted Secondary structure																																																																									.	.				.
Query SS confidence																																																																									.	.				.
Query Sequence		V	V	T	A	V	A	K	A	A	F	N	S	A	V	D	A	V	R	A	G	G	R	V	V	A	V	G	L	P	P	E	S	M	S	L	D	I	P	R	L	V	L	D	G	I	E	V	V	G	S	L	V	G	T	R	Q	D	L	T	E	A	F	Q	F	A	A	E	G	K	V	V	.	.	P	K	V	.	A	L	R
Query Conservation																																																																									.	.				.
Alig confidence																																																									.																.	.				.
Template Conservation																																																									.
Template Sequence		I	E	C	T	G	A	E	A	S	I	Q	A	G	I	Y	A	T	R	S	G	G	T	L	V	L	V	G	L	G	S	E	X	T	T	V	P	L	L	H	A	A	I	R	E	V	D	I	K	G	V	F	R	Y	C	N	.	T	W	P	V	A	I	S	X	L	A	S	K	S	V	N	V	K	P	L	V	T	H	R	F
Template Known Secondary structure					S													S		T	T							S				S	S										T	T	T								S		S	S	.											T	T	S				G	G	G
Template Predicted Secondary structure																																																									.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	D	I	N	T	I	F	T	E	M	E	E	G	K	I	R	G	R	M	V	I	D	F	R
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		P	L	E	K	A	L	E	A	F	E	T	F	K	K	G	L	G	.	L	K	I	X	L	K	C	D
Template Known Secondary structure			G	G	G										T	T		S	.	S
Template Predicted Secondary structure																			.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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