Job Description P39451 Confidence 100.00% Date Thu Jan 5 12:00:50 GMT 2012 Rank 22 Aligned Residues 331 % Identity 22% Template c1kolA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dehydrogenase; PDBTitle: crystal structure of formaldehyde dehydrogenase Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		K	A	A	V	V	T	K	D	H	H	V	D	V	T	Y	K	T	L	R	S	.	.	.	.	.	.	.	L	K	H	G	E	A	L	L	K	M	E	C	C	G	V	C	H	T	D	L	H	V	K	N	G	D	F	G	D	K	T	G	V	I	L	G	H	E	G	I	G	V	V	A	E	V	G	P	G	V	T	S	L
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	V	V	Y	L	G	S	G	K	V	E	V	Q	K	I	D	Y	P	K	M	Q	D	P	R	G	K	K	I	E	H	G	V	I	L	K	V	V	S	T	N	I	C	G	S	D	Q	H	M	V	R	G	R	T	T	A	Q	V	G	L	V	L	G	H	E	I	T	G	E	V	I	E	K	G	R	D	V	E	N	L
Template Known Secondary structure									T	T												S	B		T	T	S		B		S	S																				T	T		S				T	T		B														T	T			S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.															.	.																.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.															.	.																.	.	.
Query Sequence		K	P	G	D	R	A	S	V	A	W	F	Y	E	G	C	G	H	C	E	Y	C	N	S	G	N	E	T	L	C	R	S	V	K	N	A	G	Y	.	.	.	.	.	.	.	.	.	S	V	D	G	G	M	A	E	E	C	I	V	V	A	.	.	D	Y	A	V	K	V	P	D	G	L	D	S	A	A	A	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.															.	.																.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.															.	.																.	.	.
Template Conservation
Template Sequence		Q	I	G	D	L	V	S	V	P	F	N	V	A	C	G	R	C	R	S	C	K	E	M	H	T	G	V	C	L	T	V	N	P	A	R	A	G	G	A	Y	G	Y	V	D	M	G	D	W	T	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	F	N	L	L	K	L	P	D	R	D	K	A	M	E	K	I	R	D
Template Known Secondary structure			T	T							S					S	S	S					T	T		G	G	G		S	S	S		S	S	S	S				B	T		T	T	S			B				S	B	S					S	S									S								T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	S	I	T	C	A	G	V	T	T	Y	K	A	V	K	L	S	K	I	R	P	G	Q	W	I	A	I	Y	G	L	G	G	L	G	N	L	A	L	Q	Y	A	K	N	V	F	N	A	K	V	I	A	I	D	V	N	D	E	Q	L	K	L	A	T	E	M	G	A	D	L	A	I	N	S	H	T	E	D	A	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	T	C	L	S	D	I	L	P	T	G	Y	H	G	A	V	T	A	G	V	G	P	G	S	T	V	Y	V	A	G	A	G	P	V	G	L	A	A	A	A	S	A	R	L	L	G	A	A	V	V	I	V	G	D	L	N	P	A	R	L	A	H	A	K	A	Q	G	F	E	I	A	D	L	S	L	D	T	P	L	H
Template Known Secondary structure			G	G	G	G	T												T	T			T	T									S													T	T		S							S											T	T						T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.														.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	Q	E	K	T	G	G	A	H	A	A	V	V	T	A	V	A	K	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	A	V	D	A	V	R	A	G	G	R	V	V	A	V	G	L	P	P	E	S	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	I	A	A	L	L	G	E	P	E	V	D	C	A	V	D	A	V	G	F	E	A	R	G	H	G	H	E	G	A	K	H	E	A	P	A	T	V	L	N	S	L	M	Q	V	T	R	V	A	G	K	I	G	I	P	G	L	Y	V	T	E	D	P	G	A	V	D	A	A	A	K	I	G	S	L	S	I	R	F
Template Known Secondary structure									S	S	S											T	T		B		S	S	T	T	G	G	G	S	B		T	T																				S				S			T	T		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		P	R	L	V	L	D	G	I	E	V	V	G	S	L	V	G	T	R	Q	D	L	T	E	A	F	Q	F	A	A	E	G	K	V	V	P	.	.	.	.	K	V	A	L	R	P	L	A	D	I	N	T	I	F	T	E	M	E	E	G	K	I	R	G	R	M	V	I	D
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.																						.
Template Conservation																																																														.
Template Sequence		G	L	G	W	A	K	S	H	S	F	H	T	G	Q	T	P	V	M	K	Y	N	R	A	L	M	Q	A	I	M	W	D	R	I	N	I	A	E	V	V	G	V	Q	V	I	S	L	D	D	A	P	R	G	Y	G	E	F	D	A	G	V	.	P	K	K	F	V	I	D
Template Known Secondary structure							T	T						S	S																T	T	S								T						G	G	G											T		.	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions