Job Description Q46856 Confidence 100.00% Date Thu Jan 5 12:35:16 GMT 2012 Rank 18 Aligned Residues 332 % Identity 18% Template d1sg6a_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Dehydroquinate synthase, DHQS Resolution 1.70

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		9	10	.									.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.											.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.											.	.										.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.											.	.										.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	R	.	.	.	.	.	.	.	.	I	L	F	G	K	G	A	I	A	G	.	.	L	R	E	Q	I	P	H	D	A	.	.	R	V	L	I	T	Y	G	G	G	S	V	K	K	T	G	V	L	D	Q	V	L	D	A	L	K	.	.	.	.	.	.	.	.	.	.	G	M	D	V	L	E	F	G	G	I	E
Query Conservation					.	.	.	.	.	.	.	.											.	.										.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.											.	.										.	.														.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		P	T	K	I	S	I	L	G	R	E	S	I	I	A	D	F	G	L	W	R	N	Y	V	A	K	D	L	I	S	D	C	S	S	T	T	Y	V	L	V	T	D	T	N	I	G	S	I	.	.	Y	T	P	S	F	E	E	A	F	R	K	R	A	A	E	I	T	P	S	P	R	L	L	I	Y	N	R	P	P	G	E
Template Known Secondary structure								T	T								T	T					T									S			S														.	.																S	S	S											S	S	G
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		P	N	P	A	Y	E	T	L	M	N	A	V	K	L	V	R	E	Q	K	V	.	.	.	.	.	T	F	L	L	A	V	G	G	G	S	V	L	D	G	T	K	F	I	A	A	A	A	N	Y	P	E	N	I	D	P	W	H	I	L	Q	T	G	G	K	E	I	K	S	A	I	P	M	G	C	V	L	T	L	P	A
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	K	S	R	Q	T	K	A	D	I	E	D	W	M	L	S	Q	N	P	P	C	G	R	D	T	V	V	I	A	L	G	G	G	V	I	G	D	L	T	G	F	V	A	S	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	G	V	R	Y	V	Q	V	P	T	T	L	L
Template Known Secondary structure		G	G	S	S													T	S	S	S				T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																				.	130	.	.	.	.	.	.	.	.	.	140	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	S	E	S	N	A	G	A	V	I	S	R	K	T	T	G	D	K	Q	A	F	H	S	A	H	V	Q	P	V	F	A	V	L	D	P	V	Y	T	Y	T	L	P	P	R	Q	V	A	N	G	V	V	D	A	F	V	H	T	V	E	Q	Y	V	T	K	P	V	D	A	K	I	Q	D	R	F	A	E	G	I	L
Query Conservation
Alig confidence																								.																																														.
Template Conservation																								.																																														.
Template Sequence		A	M	V	D	S	S	I	G	G	K	T	A	I	D	T	P	L	G	K	N	L	I	.	G	A	I	W	Q	P	T	K	I	Y	I	D	L	E	F	L	E	T	L	P	V	R	E	F	I	N	G	M	A	E	V	I	K	T	A	A	I	S	S	E	E	E	F	T	A	.	L	E	E	N	A	E	T	I	L	K	A
Template Known Secondary structure					T	T	T	S	S								T	T						.							S						G	G	G	G	G	T	S																		T	T								.
Template Predicted Secondary structure																								.																																														.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		L	T	L	I	E	D	G	P	K	A	L	K	E	P	E	N	Y	D	V	R	A	N	V	M	W	A	A	T	Q	A	L	N	G	L	I	G	A	G	V	P	Q	D	W	A	T	H	M	L	G	H	E	L	T	A	M	.	.	H	G	L	D	H	A	Q	T	L	A	I	V	L	P	A	L	W	N	E	K	R	D	T
Query Conservation																																																									.	.
Alig confidence																																																									.	.																			.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		V	R	R	E	V	T	P	G	E	H	R	F	E	G	T	E	E	I	L	K	A	R	I	L	A	S	A	R	H	K	A	Y	V	V	S	A	G	L	R	N	L	L	N	W	G	H	S	I	G	H	A	I	E	A	I	L	T	P	Q	I	L	H	G	E	C	V	A	I	G	M	V	K	E	A	E	.	.	.	.	.
Template Known Secondary structure								T	T	S		T	T	G	G	G																							G	G	G	G	G	G	T	T												T	T	T	S																.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		K	R	A	K	L	L	Q	Y	A	E	R	V	W	N	I	T	E	G	S	D	D	E	R	I	D	A	A	I	A	A	T	R	N	F	F	E	Q	L	G	V	P	T	H	L	S	D	Y	G	L	D	G	S	.	.	.	.	.	.	S	I	P	A	L	L	K	K	L	E	E	H	G	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.										.	.	.	.	.	.	.	.																													.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	A	R	H	L	G	I	L	K	.	.	.	.	.	.	.	.	G	V	A	V	S	R	I	V	K	C	L	A	A	Y	G	L	P	T	S	L	K	D	A	R	I	R	K	L	T	A	G	K	H	C	S	V	D	Q	L	M	F	N	M	A	L	D	K	K	I	V	L	L	S	A	I	G
Template Known Secondary structure		.	.	.	.	.	.	.					T	T		S		.	.	.	.	.	.	.	.														T	T				S	T	T								T	T	T														T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
									301	.	.	.	.	.	.	.	.									310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	Q	L	G	E	N	H	D	I	T	L	D	V	S	R	R	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	Y	E	T	R	A	S	V	V	A	N	E	D	I	R	V	V	L
Template Known Secondary structure				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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