Job Description Q46856 Confidence 100.00% Date Thu Jan 5 12:35:16 GMT 2012 Rank 21 Aligned Residues 264 % Identity 19% Template c3clhA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of 3-dehydroquinate synthase (dhqs)from2 helicobacter pylori Resolution 2.40 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																													.	.																																.	.	.
Query SS confidence																													.	.																																.	.	.
Query Sequence		D	A	R	V	L	I	T	Y	G	G	G	S	V	K	K	T	G	V	L	D	Q	V	L	D	A	L	K	.	.	G	M	D	V	L	E	F	G	G	I	E	P	N	P	A	Y	E	T	L	M	N	A	V	K	L	V	R	E	Q	K	V	.	.	.	T	F	L	L	A	V	G	G	G	S	V	L	D	G	T	K	F
Query Conservation																													.	.																																.	.	.
Alig confidence																	.	.											.	.																																.	.	.
Template Conservation																	.	.
Template Sequence		K	Q	K	A	L	I	I	S	D	S	I	V	A	G	L	.	.	H	L	P	Y	L	L	E	R	L	K	A	L	E	V	R	V	C	V	I	E	S	G	E	K	Y	K	N	F	H	S	L	E	R	I	L	N	N	A	F	E	M	Q	L	N	R	H	S	L	M	I	A	L	G	G	G	V	I	S	D	M	V	G	F
Template Known Secondary structure		S	S												T	T	.	.	T						T	T				S									S	S	G	G	G		S														T	T			T	T								S
Template Predicted Secondary structure																	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	A	A	N	Y	P	E	N	I	D	P	W	H	I	L	Q	T	G	G	K	E	I	K	S	A	I	P	M	G	C	V	L	T	L	P	A	T	G	S	E	S	N	A	G	A	V	I	S	R	K	T	T	G	D	K	Q	A	F	H	S	A	H	V	Q	P	V	F	A	V	L	D	P	V	Y	T	Y	T	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Sequence		A	S	S	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	G	I	D	F	I	N	I	P	T	T	L	L	A	Q	V	D	A	S	V	G	G	K	T	G	I	N	T	P	Y	G	K	N	L	I	G	.	S	F	H	Q	P	K	A	V	Y	M	D	L	A	F	L	K	T	L
Template Known Secondary structure						G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S						T	T	S	S	S								T	T							.						S						T	T	S	G	G	G	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
		104	.	.	.	.																				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	R	Q	V	A	N	G	V	V	D	A	F	V	H	T	V	E	Q	Y	V	T	K	P	V	D	A	K	I	Q	D	R	F	A	E	G	I	L	L	T	L	I	E	D	G	P	K	A	L	K	E	P	E	N	Y	D	V	R	A	N	V	M	W	A	A	T	Q	A	L	N	G	L	I	G	A	G	V	P	Q	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		E	K	R	E	F	Q	A	G	V	A	E	I	I	K	M	A	V	C	F	D	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	R	L	E	T	K	D	L	K	D	C	L	E	E	V	I	F	Q	S	V	N	I	K	A	Q	V	V	R	A	G	.	.	.	L
Template Known Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S		T	T	T	S																		T	T	.	.	.	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		W	A	T	H	M	L	G	H	E	L	T	A	M	H	G	.	.	.	L	D	H	A	Q	T	L	A	I	V	L	P	A	L	W	N	E	K	R	D	T	K	R	A	K	L	L	Q	Y	A	E	R	V	W	N	I	T	E	G	S	D	D	E	R	I	D	A	A	I	A	A	T	R	N	F	F	E	Q	L	G	V	P
Query Conservation																	.	.	.
Alig confidence																	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		N	Y	G	H	T	F	G	H	A	I	E	K	E	T	D	Y	E	R	F	L	H	G	E	A	I	A	I	G	M	R	M	A	N	D	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	S	L	G	M	L	T	.	.	.	.	.	.	.	.	L	K	E	Y	E	R	I	E	N	L	L	K	K	F	D	L	I
Template Known Secondary structure		T	T	T											T	T	T	S	S																	.	.	.	.	.	.	.	.	.	.	.	.						T	S	S		.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.													.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		341	.	.	.	.	.													.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	L	S	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	G	S	S	I	P	A	L	L	K	K
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	Y	K	F	I	L	P	K	G	V	G	A	F	E	V	A	S	H	I	P	K	E	T	I	I	K	V	L	E	K
Template Known Secondary structure											S	S	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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