Job Description Q46856 Confidence 23.77% Date Thu Jan 5 12:35:16 GMT 2012 Rank 171 Aligned Residues 76 % Identity 20% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		A	R	V	L	I	T	Y	G	G	G	S	V	K	K	T	G	V	L	D	Q	V	L	D	A	L	K	G	M	D	V	L	E	F	G	G	I	E	P	N	P	A	Y	E	T	L	M	N	A	V	K	L	V	R	E	Q	K	V	T	F	L	L	.	.	.	A	V	G	G	G	S	V	L	D	G	T	K	F	I	A	A
Query Conservation																																																															.	.	.
Alig confidence																.	.									.									.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																.	.									.									.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	L	V	V	D	D	E	K	P	I	A	D	.	.	I	L	E	F	N	L	R	K	.	E	G	Y	E	V	H	C	A	.	.	.	.	.	.	.	.	.	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K
Template Known Secondary structure									S							.	.									.		T							.	.	.	.	.	.	.	.	.		S														S						T	T		S	S	S
Template Predicted Secondary structure																.	.									.									.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	Y	P	E	N	I	D	P	W	H	I	L	Q	T	G	G	K	E	I	K	S	A	I	P	M	G	C	V	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	D	M	P	I	I	M	L	T	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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