Job Description Q46856 Confidence 90.72% Date Thu Jan 5 12:35:16 GMT 2012 Rank 45 Aligned Residues 89 % Identity 15% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	G	A	I	A	G	L	R	E	Q	I	P	H	D	A	R	V	L	I	T	Y	G	G	G	S	V	K	K	T	G	V	L	D	Q	V	L	D	A	L	K	G	M	D	V	L	E	F	G	G	I	E	P	N	P	A	Y	E	T	L	M	N	A	V	K	L	V	R	E	Q	K	V	T	F	L	L	A	V	G	G
Query Conservation
Alig confidence																																									.	.										.	.	.	.	.	.																					.	.
Template Conservation																																									.	.										.	.	.	.	.	.																					.	.
Template Sequence		R	F	D	T	M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	G	V	.	.	K	I	K	E	F	L	F	S	S	.	.	.	.	.	.	E	D	E	I	T	T	L	I	S	K	V	K	T	E	N	I	K	I	V	V	.	.	S	G
Template Known Secondary structure													G	G	G		S								S	S		S	S										T		.	.									S	.	.	.	.	.	.	G	G	G											T	T						.	.
Template Predicted Secondary structure																																									.	.										.	.	.	.	.	.																					.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	V	L	D	G	T	K	F	I	A	A	A	A	N	Y	P	E	N	I	D	P	W	H	I	L	Q	T	G	G	K	E	I	K	S	A	I	P	M	G	C	V	L	T
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	V	T	D	E	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	G	L	Y	G	E	T	I	N	S
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.																										.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions