Job Description Q46856 Confidence 100.00% Date Thu Jan 5 12:35:16 GMT 2012 Rank 12 Aligned Residues 330 % Identity 15% Template c1ta9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																														.
Query SS confidence																																.	.																														.
Query Sequence		M	N	N	F	N	L	H	T	P	T	R	I	L	F	G	K	G	A	I	A	G	L	R	E	Q	I	P	H	D	A	.	.	R	V	L	I	T	Y	G	G	G	S	V	K	K	T	G	V	L	D	Q	V	L	D	A	L	K	G	M	D	V	.	L	E	F	G	G	I	E	P	N	P	A	Y	E	T	L	M	N	A
Query Conservation																																.	.																														.
Alig confidence																																.	.														.	.															.
Template Conservation																																															.	.
Template Sequence		S	K	D	R	I	F	T	S	P	Q	K	Y	V	Q	G	R	H	A	F	T	R	S	Y	M	Y	V	K	K	W	A	T	K	S	A	V	V	L	A	D	Q	N	V	W	N	I	.	.	C	A	N	K	I	V	D	S	L	S	Q	N	G	M	T	V	T	K	L	V	F	G	G	E	A	S	L	V	E	L	D	K	L
Template Known Secondary structure			S	S	B						S						T	T	G	G	G	G						T	T	T		S	S														.	.	T											T	T										S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	V	R	E	Q	K	V	T	F	L	L	A	V	G	G	G	S	V	L	D	G	T	K	F	I	A	A	A	A	N	Y	P	E	N	I	D	P	W	H	I	L	Q	T	G	G	K	E	I	K	S	A	I	P	M	G	C	V	L	T	L	P	A	T	G	S	E	S	N	A	G	A	V	I	S	R	K	T	T
Query Conservation
Alig confidence				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	.	Q	C	P	D	D	T	Q	V	I	I	G	V	G	G	G	K	T	M	D	S	A	K	Y	I	A	H	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	S	I	I	C	P	T	T	A	S	S	D	A	A	T	S	S	L	S	V	I	Y	Q	F	Q	K
Template Known Secondary structure			T	.	T	S		T	T									S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S		S		S		T	T		S
Template Predicted Secondary structure				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		G	D	K	Q	A	F	H	S	A	H	V	Q	P	V	F	A	V	L	D	P	V	Y	T	Y	T	L	P	P	R	Q	V	A	N	G	V	V	D	A	F	V	H	T	V	E	Q	Y	V	T	K	P	V	D	A	.	.	.	.	.	.	.	.	.	K	I	Q	D	R	F	A	E	G	I	L	L	T	L	I	E	D	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		Y	S	F	Y	P	L	N	.	.	.	.	.	P	N	L	I	F	I	D	T	D	V	I	V	R	A	P	V	R	F	L	I	S	G	I	G	D	A	L	S	T	W	V	E	T	E	S	V	I	R	S	N	S	T	S	F	A	G	G	V	A	S	I	A	G	R	Y	I	A	R	A	C	K	D	T	L	E	K	Y	A
Template Known Secondary structure						S	S		.	.	.	.	.		S												S																									T	T				T	T	S	S	B
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		229	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure								.	.	.															.																										.	.	.	.
Query SS confidence								.	.	.															.																										.	.	.	.
Query Sequence		P	K	A	L	K	E	.	.	.	P	E	N	Y	D	V	R	A	N	V	M	W	A	A	.	T	Q	A	L	N	G	L	I	G	A	G	V	P	Q	D	W	A	T	H	M	L	G	H	E	L	.	.	.	.	T	A	M	H	G	L	D	H	A	Q	T	L	A	I	V	L	P	A	L	W	N	E	K	R	D	T	K
Query Conservation								.	.	.															.																										.	.	.	.
Alig confidence								.	.	.															.												.	.	.												.	.	.	.																											.
Template Conservation																																					.	.	.																																										.
Template Sequence		L	S	A	I	L	S	N	T	R	G	V	C	T	E	A	F	E	N	V	V	E	A	N	T	L	M	S	G	L	G	F	E	N	G	G	.	.	.	L	A	A	A	H	A	I	H	N	G	M	T	A	I	H	G	P	V	H	R	L	M	H	G	E	K	V	A	Y	G	T	L	V	Q	V	V	L	E	D	W	P	.
Template Known Secondary structure											T																							S	S		.	.	.												G	G	G		G	G	G	G	G	S																	T	T			.
Template Predicted Secondary structure																																					.	.	.																																										.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		R	A	K	L	L	Q	Y	A	E	R	V	W	N	I	T	E	G	S	D	D	E	R	I	D	A	A	I	A	A	T	R	N	F	F	E	Q	L	G	V	P	T	H	L	S	D	Y	G	L	D	.	.	.	G	S	S	I	P	A	L	L	K	K	L	E	E	H	G	M	T	Q	L	G	E	N	H	D	I	T	L	D
Query Conservation																																																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	D	F	N	N	L	A	S	F	M	A	K	C	H	L	P	I	T	L	E	E	L	G	I	P	N	V	T	D	E	E	L	L	M	V	G	R	A	T	L	R	P	D	E	S	I	H	N	M	S	K	K	F	N	P	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T				S					T		T	T														T		T	T	S	G	G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	R	R	I	Y	E	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	A	D	A	I	K	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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