Return to main results Retrieve Phyre Job Id

Job DescriptionP37640
Confidence88.47%DateThu Jan 5 11:56:12 GMT 2012
Rank197Aligned Residues56
% Identity13%Templatec3iwfA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcription regulator rpir family; PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150...... ...160.........170.........180.........190........
Predicted Secondary structure 

















......









Query SS confidence 

















. . . . . .









































Query Sequence  LKSLSARQREILTMLAAG. . . . . . ESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI
Query Conservation     

  
  

     
...... 
 



  
 

  

  
   
  

 
 

 

      
Alig confidence 

















......
















....




















Template Conservation     

  
  

 


         

 


    

 


.... 

 




 

 


  
  
Template Sequence  YPYFTKNEKKIAQFILNYPHKVVNXTSQEIANQLETSSTSI. . . . IRLSKKVTPGGFNELKTRLSK
Template Known Secondary structure  GGGS

TT

TS
....STTT
Template Predicted Secondary structure 







....



Template SS confidence 

































































   12.......20.........30.........40.........50.. .......60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions