Return to main results Retrieve Phyre Job Id

Job DescriptionP37640
Confidence99.60%DateThu Jan 5 11:56:12 GMT 2012
Rank58Aligned Residues120
% Identity17%Templatec3hv2B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLIT
Query Conservation 







    
  
   
        
  
    

   
     



 
                       
   
Alig confidence 






















..






















































Template Conservation   






       
   
   ..
  
  
     
   
     
 

 
  

   
      
        

 
Template Sequence  PEILLVDSQEVILQRLQQLLSPL. . PYTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILL
Template Known Secondary structure 

S
TTS..S
SSTTS

S
S

SSS

TT
Template Predicted Secondary structure 




..























Template SS confidence 















































































   13......20.........30..... ....40.........50.........60.........70.........80.........90
 
   81........90....... ..100.........110.........120..
Predicted Secondary structure 






.











Query SS confidence 
















.
























Query Sequence  ATDCNKRWLQEVIHFNV. LAIVPRDSTVETFALAVNSAAMGMM
Query Conservation                   .                         
Alig confidence 
















.
























Template Conservation 
              
     
 

     
   
   
    
Template Sequence  TGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEHQH
Template Known Secondary structure  S


TT

SSS

Template Predicted Secondary structure 













Template SS confidence 










































   91........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions