Return to main results Retrieve Phyre Job Id

Job DescriptionP37640
Confidence99.53%DateThu Jan 5 11:56:12 GMT 2012
Rank86Aligned Residues118
% Identity14%Templatec3c3mA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70 .........
Predicted Secondary structure 




























..








Query SS confidence 




































































. .








Query Sequence  QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVV. . QFPEVKVLI
Query Conservation 






    
  
   
        
  
    

   
     



 
                 ..      
  
Alig confidence 





















..












































..








Template Conservation   





       
   
   ..
  
  
     
         
 

 
       
      

         

 
Template Sequence  TILVVDDSPXIVDVFVTXLERG. . GYRPITAFSGEECLEALNATPPDLVLLDIXXEPXDGWETLERIKTDPATRDIPVLX
Template Known Secondary structure 
S
T..T
SSS

SS

SSS
STTTTTS
Template Predicted Secondary structure 


..























Template SS confidence 















































































   4.....10.........20..... ....30.........40.........50.........60.........70.........80.
 
   80.........90.........100.........110.........120.
Predicted Secondary structure 


















Query SS confidence 









































Query Sequence  TATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM
Query Conservation                                            
Alig confidence 









































Template Conservation   
              
    
 

     
   
   
 

Template Sequence  LTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLARR
Template Known Secondary structure  SS


TTTT
S


S

Template Predicted Secondary structure 














Template SS confidence 









































   82.......90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions