Job Description P0AD42 Confidence 99.34% Date Thu Jan 5 11:19:57 GMT 2012 Rank 60 Aligned Residues 199 % Identity 12% Template d1yv9a1 SCOP info HAD-like HAD-like NagD-like Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		E	R	R	V	V	F	F	D	L	D	G	T	L	H	Q	Q	D	.	.	.	.	M	F	G	S	F	L	R	Y	L	L	R	R	Q	P	L	N	A	L	L	V	L	P	L	L	P	I	I	A	I	A	L	L	I	K	G	R	A	A	R	W	P	M	S	L	L	L	W	G	C	T	F	G	H	S	E	A	R	L	Q
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.
Template Sequence		D	Y	Q	G	Y	L	I	D	L	D	G	T	I	Y	L	G	K	E	P	I	P	A	G	K	R	F	V	E	R	L	Q	E	K	D	L	P	F	L	F	V	T	N	N	T	.	.	.	.	.	.	.	.	T	K	S	P	E	T	V	A	Q	R	L	A	N	E	F	D	I	H	V	P	A	S	L	V	Y	T	A	T
Template Known Secondary structure											B	T	T	T			T	T																T	T											.	.	.	.	.	.	.	.	S	S													S						G	G	G
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.									.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Query Sequence		T	L	Q	A	D	F	V	R	W	F	R	D	N	V	T	A	F	P	L	V	Q	E	R	L	T	T	Y	L	L	S	S	D	A	D	I	.	.	.	.	.	.	.	W	L	I	T	G	S	P	Q	P	L	V	E	A	V	Y	F	D	T	P	W	L	P	R	V	N	L	I	A	S	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	T	I	D	Y	M	K	E	A	N	R	G	K	K	V	F	V	I	G	E	A	G	L	I	D	L	I	L	E	A	G	F	E	W	D	E	T	N	P	D	Y	V	V	V	G	L	D	T	E	L	S	Y	E	K	V	V	L	A	T	L	A	I	Q	K	G	A	L	F	I	G	T	N	P	D	K	N	I	P	T
Template Known Secondary structure															S						S											T	T					S	S	S		S								T	T															T	T						S				S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
															145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.					.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.													.					.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.													.					.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	Q	R	G	Y	G	G	W	V	L	T	M	R	C	L	G	H	E	K	V	A	Q	L	E	R	K	I	G	T	P	L	R	L	Y	S	G	Y	S	D	S	.	N	Q	D	N	P	L	L	Y	F	C	Q	H	.	R	W	R	V	.	.	.	.	T	P	R	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.													.					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.													.					.	.	.	.
Template Conservation
Template Sequence		E	R	G	L	L	P	G	A	G	S	V	V	T	F	V	E	T	A	T	Q	T	K	P	V	Y	I	G	K	P	K	A	I	I	M	E	R	A	I	A	H	L	G	V	E	K	E	Q	V	I	M	V	G	D	N	Y	E	T	D	I	Q	S	G	I	Q	N	G	I	D	S	L	L	V	T	S	G	F	T	P	K	S
Template Known Secondary structure		T	T																		T							S	T	T	S													S		G	G	G						S		T	T	T									T							T	T	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		206	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	Q	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	P	T	L	P
Template Known Secondary structure		S	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions