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Job DescriptionP0AD42
Confidence99.67%DateThu Jan 5 11:19:57 GMT 2012
Rank38Aligned Residues125
% Identity16%Templatec3ewiB_
PDB info PDB header:transferaseChain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase; PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQA
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Template Sequence  EIKLLVCNIDGCLTNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . H
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S
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   8.10.........20... .
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  DFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEK
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Template Sequence  IYVSGDQKEIISYDVKDAIGISLLKKSGIEVRLISERACSKQTLSALKLDCKTEVS. . . . . . . . . . . . . . . . . VSDKLAT
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TT





TT

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TTTTGGG





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S
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   25....30.........40.........50.........60.........70.........80 .......
 
   165....170.........180.........190.........200. ........
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Query Sequence  VAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRV. TPRGELQQ
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Template Sequence  VDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQK
Template Known Secondary structure  TT

GGG

SGGGSS
TT

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   88.90.........100.........110.........120.........130...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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