Job Description P10371 Confidence 67.93% Date Thu Jan 5 11:32:09 GMT 2012 Rank 486 Aligned Residues 193 % Identity 13% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	.	.	.	.	.	.	.	.	.	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	.	.	.	.	.	E	E	D	V	A	A	L	L	E	A	G	V	A
Query Conservation																																.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence															.	.	.															.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		A	E	I	A	Y	E	L	W	S	G	G	I	D	.	.	.	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q
Template Known Secondary structure											T	T		S	.	.	.						T	T		S		B	T	T	B																					S	S							B			S	S															T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		98	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																													.	.	.	.	.	.
Query SS confidence							.	.																																													.	.	.	.	.	.
Query Sequence		R	V	V	V	G	.	.	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	.	.	.	.	.	.	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L
Query Conservation							.	.																																													.	.	.	.	.	.
Alig confidence							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H
Template Known Secondary structure																										T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T					S		T	T	S	S														T		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																										.	.	.	.	.																									.								.
Query SS confidence																										.	.	.	.	.																									.								.
Query Sequence		C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	.	.	.	.	.	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	.	G	V	R	G	V	I	V	.	G	R	A	L	L	E	G	K	F	T	V	K	E	A	I	A	C	W
Query Conservation																										.	.	.	.	.																									.								.
Alig confidence																										.	.	.	.	.							.						.												.								.
Template Conservation																																					.						.
Template Sequence		T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	.	A	S	G	G	L	.	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A	G	A	K	A	L
Template Known Secondary structure							S	S	S																S			T	T								.			S	S		.		G	G	G										S												T		T	T
Template Predicted Secondary structure																																					.						.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		243	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions