Job Description P10371 Confidence 99.67% Date Thu Jan 5 11:32:09 GMT 2012 Rank 32 Aligned Residues 203 % Identity 19% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																						.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	R	L	H	Q	G	D	Y	G	K	Q	R	D	Y	G	N	D	P	L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	P	L	I	K	T	L	V	A	G
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																		.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																		.	.	.
Template Sequence		V	P	F	V	T	L	G	D	P	G	I	E	Q	S	.	.	.	.	.	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	.	.	.	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K
Template Known Secondary structure							T	T	S	S						.	.	.	.	.										T	T		S	S				.	.	.					S			T	T															T	T
Template Predicted Secondary structure																.	.	.	.	.																		.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		72		.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure			.														.	.	.	.	.	.
Query SS confidence			.														.	.	.	.	.	.
Query Sequence		V	.	N	V	P	V	Q	V	G	G	G	V	R	S	E	.	.	.	.	.	.	E	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G
Query Conservation			.														.	.	.	.	.	.
Alig confidence			.														.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S													T	T													T							T	T			G	G	G											T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	.	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I
Query Conservation																										.
Alig confidence		.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	A	A	P	A	L	Q	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I
Template Known Secondary structure		.	.	.	.	.	.	.															S						S	S	S	S				S	S	S														T	T								S	S			S										T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		224	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		V	G	R	A	L	L	E	.	.	.	.	G	K	F	T	V	K	E	A	I	A	C	W	Q	N
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		S	G	S	A	I	V	K	I	I	E	K	N	L	A	S	P	K	Q	M	L	A	E	L	R	S
Template Known Secondary structure													T	T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions