 |
Job Description | P10371 | Confidence | 94.50% | Date | Thu Jan 5 11:32:09 GMT 2012 |
Rank | 269 | Aligned Residues | 50 |
% Identity | 22% | Template | d1kv5a_ |
SCOP info | TIM beta/alpha-barrel
| Triosephosphate isomerase (TIM)
| Triosephosphate isomerase (TIM)
|
Resolution | 1.65 |
|
 |
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | L | A | G | S | N | V | S | L | Y | E | E | V | C | A | R | Y | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | A | F | Q | S | S | G | G | I | G | D | I | D | D | V | A | A | L | R | G | T | . |
G | V | R | G | V | I | V | G | R | A |
Query Conservation |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   | . |
|   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
| . |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |
|
Template Sequence |   |
G | T | G | K | V | A | T | P | Q | Q | A | Q | E | A | H | A | L | I | S | S | W | V | S | S | K | I | G | A | D | V | A | G | E | L | R | I | L | Y | G | G | S | V | . |
N | G | K | N | A | R | T | L | Y | Q | Q | R | D | V | N | G | F | L | V | G | G | A |
Template Known Secondary structure |   |
S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|  |  |  |  | S | S |
| . |
| T | T | T |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  | S | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|