Return to main results Retrieve Phyre Job Id

Job DescriptionP10371
Confidence85.01%DateThu Jan 5 11:32:09 GMT 2012
Rank373Aligned Residues181
% Identity14%Templated1ct5a_
SCOP infoTIM beta/alpha-barrel PLP-binding barrel "Hypothetical" protein ybl036c
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSQD
Query Conservation 
   
      


 
 
 

     
       
  
     


   


   
        

  
 
         
Alig confidence 





















..........















































Template Conservation    
 
      
     

   ..........

               

                  
 



   
 
Template Sequence  PASDIQILYDHGVREFGENYVQ. . . . . . . . . . ELIEKAKLLPDDIKWHFIGGLQTNKCKDLAKVPNLYSVETIDSLKKAK
Template Known Secondary structure 
T



..........S
TT

S


GGG
TT
S
Template Predicted Secondary structure 






..........
















Template SS confidence 















































































   52.......60.........70... ......80.........90.........100.........110.........120.
 
   111........120.........130.........140.........150.........160... ......170.........180......
Predicted Secondary structure 




















....















Query SS confidence 




















































. . . .






















Query Sequence  MVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPV. . . . GLKHVLCTDISRDGTLAGSNVSL
Query Conservation           
   

   
          
          
            ....
   

   
   
   
 
   
Alig confidence 



























.....



















....






















Template Conservation   
   
         
 
 
 




 
..... 
                       
 
 

 

    
    
   
Template Sequence  KLNESRAKFQPDCNPILCNVQINTSHED. . . . . QKSGLNNEAEIFEVIDFFLSEECKYIKLNGLXTIGSWNRDFATLVEW
Template Known Secondary structure 
TTS

B

SSS
.....
SSSB

STT

S





Template Predicted Secondary structure 











.....

















Template SS confidence 















































































   122.......130.........140......... 150.........160.........170.........180.........190......
 
   187..190.........200.........210.........220.........
Predicted Secondary structure 












Query SS confidence 










































Query Sequence  YEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALL
Query Conservation     
      



  


    

  
   
 
 






 
Alig confidence 













.





..



















Template Conservation     
         
.
 
 
 ..    
   
   



  

Template Sequence  KKKIDAKFGTSLKL. SXGXSA. . DFREAIRQGTAEVRIGTDIF
Template Known Secondary structure 



.


TT..TTT
SS
Template Predicted Secondary structure 




.





..







Template SS confidence 










































   206...210......... 220..... ....230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions