Job Description P10371 Confidence 77.77% Date Thu Jan 5 11:32:09 GMT 2012 Rank 433 Aligned Residues 195 % Identity 16% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90					.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																							.	.								.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																							.	.								.	.	.	.
Query Sequence		L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	.	.	.	.	.	.	.	.	.	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	.	.	S	E	E	D	V	A	A	.	.	.	.	L	L	E	A	G	V
Query Conservation																																.	.	.	.	.	.	.	.	.																							.	.								.	.	.	.
Alig confidence															.	.	.															.	.	.	.	.	.	.	.	.																							.	.								.	.	.	.
Template Conservation															.	.	.
Template Sequence		G	R	V	V	Y	E	G	L	K	G	G	L	D	.	.	.	F	M	K	D	D	E	N	I	N	S	Q	P	F	M	H	W	R	D	R	F	L	F	V	M	D	A	V	N	K	A	S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S
Template Known Secondary structure											T	T		S	.	.	.						T	T		S	S		T	T	S																					T	S											S	S														T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		A	R	V	V	V	G	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	.	.	.	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I
Query Conservation																																																		.	.	.
Alig confidence									.			.																					.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation									.			.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	I	M	V	D	L	.	I	V	.	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	.	.	.	.	.	.	.	.	.	.	L	H	R	A	G	H	G	T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A
Template Known Secondary structure		S						G	.	G	G	.														T	T	T					.	.	.	.	.	.	.	.	.	.				T	T	T					S		T	T	S	S														T		S							T
Template Predicted Secondary structure									.			.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.		.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.											.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.								.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.								.
Query Sequence		S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	.	G	V	R	G	V	I	V	.	G	R	A	L	L
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.								.
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.						.												.								.
Template Conservation		.	.																																															.						.
Template Sequence		.	.	V	G	K	L	E	G	D	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	M	P	V	.	A	S	G	G	I	.	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G	T	I
Template Known Secondary structure		.	.	T	S	S	T	T																S					B	G	G	G	T	B		S					T	T								.				S		.		G	G	G										S	S
Template Predicted Secondary structure		.	.																																															.						.
Template SS confidence
				334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	K	F	T	V	K	E	A	I	A	C	W	Q	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	P	Q	G	I	Q	A	G	A	T	A	N	R	V	A
Template Known Secondary structure		T		T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions