Job Description P10371 Confidence 99.47% Date Thu Jan 5 11:32:09 GMT 2012 Rank 45 Aligned Residues 206 % Identity 15% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	G	T	V	V	R	L	H	Q	G	D	Y	G	K	Q	R	D	Y	G	N	D	P	L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	K	D	P	A	K	R	Q	I	P	L	I	K	T	L	V	A
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																		.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																		.	.	.
Template Sequence		E	N	A	N	V	A	Y	T	V	L	G	Y	P	N	L	Q	T	S	.	.	.	.	.	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	.	.	.	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R
Template Known Secondary structure		S	S								T	T	S	S						.	.	.	.	.						T	G	G	G	S	S		S					.	.	.				S	S					S	S													T	T												T
Template Predicted Secondary structure																				.	.	.	.	.																		.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		71	.	.		.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure					.													.	.	.	.	.	.
Query SS confidence					.													.	.	.	.	.	.
Query Sequence		G	V	N	.	V	P	V	Q	V	G	G	G	V	R	S	E	.	.	.	.	.	.	E	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	S	Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S
Query Conservation					.													.	.	.	.	.	.
Alig confidence					.													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S																										T	T							T	T			G	G	G												T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	.	.	.	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R
Query Conservation																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.																																															.
Template Conservation		.	.	.	.	.	.	.	.																																																																					.
Template Sequence		.	.	.	.	.	.	.	.	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K	.	V	A	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	S										T	T			S								S		S	S																			T	T			S						S	S			S	S							T	T	.	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																					.
Template SS confidence
										149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.
		221	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	V	I	V	G	R	A	L	L	E	.	.	G	K	F	T	V	K	E	A	I	A	C	W	Q	N
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I	E	E
Template Known Secondary structure													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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