Job Description P10371 Confidence 94.01% Date Thu Jan 5 11:32:09 GMT 2012 Rank 280 Aligned Residues 166 % Identity 11% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	.	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	S	Q	D
Query Conservation																																.
Alig confidence																.	.	.	.													.																			.	.														.
Template Conservation																.	.	.	.																																.	.														.
Template Sequence		I	D	T	A	G	R	L	K	E	I	C	A	K	L	.	.	.	.	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	D	.	.	V	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R	Q	T	D
Template Known Secondary structure															T	.	.	.	.	T																								T							.	.			S									T	T	.		S						G	G	G	T	T
Template Predicted Secondary structure																.	.	.	.																																.	.														.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.															.	.
Query SS confidence																																																						.	.	.	.	.	.															.	.
Query Sequence		M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	E	Q	L	V	E	T	Y	L	P	.	.	.	.	.	.	V	G	L	K	H	V	L	C	T	D	I	S	R	D	.	.	G	T	L	A	G	S
Query Conservation																																																						.	.	.	.	.	.															.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.															.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	H	A	C	A	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S
Template Known Secondary structure								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T	S		G	G	G															T	T			S													S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.																			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.										.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		N	V	S	L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	.	.	.	.	.	.	.	.	.	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence													.	.													.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		D	M	R	S	L	A	I	M	R	E	T	.	.	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F	M
Template Known Secondary structure									G	G	G	G	.	.	S	S										T						T	T															S
Template Predicted Secondary structure													.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions