Job Description P10371 Confidence 75.16% Date Thu Jan 5 11:32:09 GMT 2012 Rank 446 Aligned Residues 175 % Identity 16% Template c3r79B_ PDB info PDB header:structure genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharactertized protein from agrobacterium2 tumefaciens Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	P	L	P	R	L	Q	D	Y	A	A	Q	G	A	E	V	L	H	L	V	D	L	T	G	A	K	D	P	A	K	R	Q	I	P	L	I	K	T	L	V	A	G	V	N	V	P	V	Q	V	G	G	G	V	R	S	E	E	D	V	A	A	L	L	E	A	G	V	A	R	V	V	V	G	S	T	A	V	K	S
Query Conservation
Alig confidence																													.	.	.	.	.	.	.																																										.	.
Template Conservation																													.	.	.	.	.	.	.																																										.	.
Template Sequence		T	F	D	A	E	A	I	Q	P	V	I	D	A	G	Q	R	V	F	G	E	N	R	V	Q	E	A	Q	.	.	.	.	.	.	.	G	K	W	P	A	L	K	E	K	T	S	D	I	E	L	H	L	I	G	P	L	Q	S	N	K	A	A	D	A	V	A	L	F	D	V	V	E	S	I	D	R	.	.	E	K	I
Template Known Secondary structure		T												T	T							S							.	.	.	.	.	.	.											T	T							S				G	G	G									S							S	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.																																										.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		Q	D	M	V	K	G	W	F	E	R	F	G	A	D	A	L	V	L	A	L	D	V	R	I	D	E	Q	G	N	K	Q	V	A	V	S	G	W	Q	E	N	S	G	V	S	L	.	.	.	E	Q	L	V	E	T	Y	L	P	V	G	L	K	H	V	L	C	T	D	I	S	R	D	G	T	L	A	G	S	N	V	S
Query Conservation																																															.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	A	L	S	E	E	C	A	R	Q	G	R	S	L	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	Q	V	N	T	G	L	Q	K	A	G	I	D	P	R	E	T	V	A	F	V	A	F	C	R	D	E	L	K	L	P	V	E	G	L	X	C	I	P	P	A	E	N	P	G	P	H	F	A
Template Known Secondary structure													T						.	.	.	.	.	.	.	.	.	.	.	.	.				B		T	T					S	B															T	S																S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.														.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	E	V	C	A	R	Y	P	Q	V	A	F	Q	S	S	G	G	I	G	D	I	D	D	V	A	A	L	R	G	T	G	V	R	G	V	I	V	G	R	A	L	L
Query Conservation
Alig confidence											.									.	.	.
Template Conservation											.									.	.	.
Template Sequence		L	L	A	K	L	A	G	Q	C	.	G	L	E	K	L	S	X	G	.	.	.	X	S	G	D	F	E	T	A	V	E	F	G	A	T	S	V	R	V	G	S	A	I	F
Template Known Secondary structure											.	T								.	.	.		T	T	T							T	T		S
Template Predicted Secondary structure											.									.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions